Stability Curve Prediction of Homologous Proteins Using Temperature-Dependent Statistical Potentials. - Fabrizio Pucci; Marianne Rooman (PLoS Comput. Biol., 2014)

SCooP: an accurate and fast predictor of protein stability curves as a function of temperature. - Fabrizio Pucci; Jean Marc Kwasigroch; Marianne Rooman (Bioinform., 2017)

Quantification of biases in predictions of protein stability changes upon mutations. - Fabrizio Pucci; Katrien V. Bernaerts; Jean Marc Kwasigroch; Marianne Rooman (Bioinform., 2018)

SOLart: a structure-based method to predict protein solubility and aggregation. - Qingzhen Hou; Jean Marc Kwasigroch; Marianne Rooman; Fabrizio Pucci (Bioinform., 2020)

pydca v1.0: a comprehensive software for direct coupling analysis of RNA and protein sequences. - Mehari B. Zerihun; Fabrizio Pucci; Emanuel K. Peter; Alexander Schug (Bioinform., 2020)

MutaFrame - an interpretative visualization framework for deleteriousness prediction of missense variants in the human exome. - François Ancien; Fabrizio Pucci; Wim F. Vranken; Marianne Rooman (Bioinform., 2021)

AI challenges for predicting the impact of mutations on protein stability. - Fabrizio Pucci; Martin Schwersensky; Marianne Rooman (CoRR, 2021)

BRANEart: Identify Stability Strength and Weakness Regions in Membrane Proteins. - Sankar Basu; Simon S. Assaf; Fabian Teheux; Marianne Rooman; Fabrizio Pucci (Frontiers Bioinform., 2021)

SpikePro: a webserver to predict the fitness of SARS-CoV-2 variants. - Gabriel Cia; Jean Marc Kwasigroch; Marianne Rooman; Fabrizio Pucci (Bioinform., 2022)

Critical review of conformational B-cell epitope prediction methods. - Gabriel Cia; Fabrizio Pucci; Marianne Rooman (Briefings Bioinform., 2023)

Estimating the Vertical Ionization Potential of Single-Stranded DNA Molecules. - Marianne Rooman; Fabrizio Pucci (J. Chem. Inf. Model., 2023)

Quantification of biases in predictions of protein-protein binding affinity changes upon mutations. - Matsvei Tsishyn; Fabrizio Pucci; Marianne Rooman (Briefings Bioinform., 2024)

pycofitness - Evaluating the fitness landscape of RNA and protein sequences. - Fabrizio Pucci; Mehari B. Zerihun; Marianne Rooman; Alexander Schug (Bioinform., 2024)