E. coli Promoter Prediction Using Feed-Forward Neural Networks. - Fan Zhang 008; Michael D. Kuo; Adrian Brunkhors (EMBC, 2006)

A neural network approach to multi-biomarker panel development based on LC/MS/MS proteomics profiles: A case study in breast cancer. - Fan Zhang 008; Jake Y. Chen (CBMS, 2009)

HPD: an online integrated human pathway database enabling systems biology studies. - Sudhir R. Chowbina; Xiaogang Wu; Fan Zhang 008; Peter M. Li; Ragini Pandey; Harini N. Kasamsetty; Jake Y. Chen (BMC Bioinform., 2009)

Breast cancer plasma protein biomarker discovery by coupling LC-MS/MS proteomics and systems biology. - Fan Zhang 008; Mu Wang; Jake Y. Chen (BCB, 2010)

PEPPI: a peptidomic database of human protein isoforms for proteomics experiments. - Ao Zhou 004; Fan Zhang 008; Jake Y. Chen (BMC Bioinform., 2010)

HOMER: a human organ-specific molecular electronic repository. - Fan Zhang 008; Jake Y. Chen (BMC Bioinform., 2011)

An integrated proteomics analysis of bone tissues in response to mechanical stimulation. - Jiliang Li; Fan Zhang 008; Jake Y. Chen (BMC Syst. Biol., 2011)

IPAD: the Integrated Pathway Analysis Database for Systematic Enrichment Analysis. - Fan Zhang 008; Renee Drabier (BMC Bioinform., 2012)

Dual-function biomarkers for detection of breast cancer and its cancer type: Invasive versus non-invasive. - Fan Zhang 008; Tao Liu; Mu Wang; Renee Drabier (BIBM, 2013)

SASD: the Synthetic Alternative Splicing Database for identifying novel isoform from proteomics. - Fan Zhang 008; Renee Drabier (BMC Bioinform., 2013)

Novel alternative splicing isoform biomarkers identification from high-throughput plasma proteomics profiling of breast cancer. - Fan Zhang 008; Mu Wang; Tran Michael; Renee Drabier (BMC Syst. Biol., 2013)

Computational Biomarker Discovery. - Fan Zhang 008; Xiaogang Wu; Jake Yue Chen (Approaches in Integrative Bioinformatics, 2014)

Diversity of Gene Expression in Hepatocellular Carcinoma Cells. - Fan Zhang 008; Li Cui; Michael D. Kuo (Genom. Proteom. Bioinform., 2015)

Identification of novel alternative splicing biomarkers for breast cancer with LC/MS/MS and RNA-Seq. - Fan Zhang 008; Chris K. Deng; Mu Wang; Bin Deng; Robert Barber; Gang Huang (BMC Bioinform., 2020)

Rapid evolution of expression levels in hepatocellular carcinoma. - Fan Zhang 008; Michael D. Kuo (Int. J. Comput. Biol. Drug Des., 2020)

Accelerating Hyperparameter Tuning in Machine Learning for Alzheimer's Disease With High Performance Computing. - Fan Zhang 008; Melissa Petersen; Leigh Johnson; James Hall; Sid E. O'Bryant (Frontiers Artif. Intell., 2021)

A Machine Learning-Based Multiple Imputation Method for the Health and Aging Brain Study-Health Disparities. - Fan Zhang 008; Melissa Petersen; Leigh Johnson; James Hall; Raymond F. Palmer; Sid E. O'Bryant (Informatics, 2023)