SIRENE: supervised inference of regulatory networks. - Fantine Mordelet; Jean-Philippe Vert (ECCB, 2008)

Learning from positive and unlabeled examples in biology. (Méthodes d'apprentissage statistique à partir d'exemples positifs et indéterminés en biologie). - Fantine Mordelet (2010)

ProDiGe: PRioritization Of Disease Genes with multitask machine learning from positive and unlabeled examples. - Fantine Mordelet; Jean-Philippe Vert (BMC Bioinform., 2011)

TIGRESS: Trustful Inference of Gene REgulation using Stability Selection. - Anne-Claire Haury; Fantine Mordelet; Paola Vera-Licona; Jean-Philippe Vert (BMC Syst. Biol., 2012)

Stability selection for regression-based models of transcription factor-DNA binding specificity. - Fantine Mordelet; John Horton; Alexander J. Hartemink; Barbara E. Engelhardt; Raluca Gordân (Bioinform., 2013)

A bagging SVM to learn from positive and unlabeled examples. - Fantine Mordelet; Jean-Philippe Vert (Pattern Recognit. Lett., 2014)