PNS Modules for the Synthesis of Parallel Self-Organizing Hierarchical Neural Networks. - Faramarz Valafar; Okan K. Ersoy (ISCAS, 1994)

Comparative studies of two neural network architectures for modeling of human speech production. - Faramarz Valafar; Homayoun Valafar; Okan K. Ersoy; Richard G. Schwartz (ICNN, 1995)

A Parallel Implementation of Backpropagation Neural Network on MasPar MP-1. - Faramarz Valafar; Okan K. Ersoy (PDPTA, 1995)

Distributed global optimization (DGO). - Homayoun Valafar; Okan K. Ersoy; Faramarz Valafar (ICNN, 1996)

A Comparative Study of Artificial Neural Networks Using Reinforcement Learning and Multidimensional Bayesian Classification Using Parzen Density Estimation for Identification of GC-EIMS Spectra of Partially Methylated Alditol Acetates on the World Wide Web. - Faramarz Valafar; Homayoun Valafar (IC-AI, 1999)

Identification of H-NMR Spectra of Xyloglucan Oligosaccharides: A Comparative Study of Artificial Neural Networks and Bayesian Classification Using Nonparametric Density Estimation. - Faramarz Valafar; Homayoun Valafar; William S. York (IC-AI, 1999)

A comparative study of linear and quadratic discriminant classifier techniques for variable selection: a case study in predicting the effectiveness of hydroxyurea treatment of sickle cell anemia. - Saeid Roushanzamir; Homayoun Valafar; Faramarz Valafar (IJCNN, 1999)

Prediction of a patient's response to a specific drug treatment using artificial neural networks. - Homayoun Valafar; Faramarz Valafar (IJCNN, 1999)

Parallel, self organizing, consensus neural networks. - Homayoun Valafar; Faramarz Valafar; Okan K. Ersoy (IJCNN, 1999)

Predicting the effectiveness of hydroxyurea in individual sickle cell anemia patients. - Homayoun Valafar; Faramarz Valafar; Alan Darvill; Peter Albersheim; Abdullah Kutlar; Kristy F. Woods; John Hardin (Artif. Intell. Medicine, 2000)

Data mining and knowledge discovery in proton nuclear magnetic resonance (1H-NMR) spectra using frequency to information transformation (FIT). - Homayoun Valafar; Faramarz Valafar (Knowl. Based Syst., 2002)

Grouping of Partially Methylated Alditol Acetates from GC-EIMS Spectra Using Principal Component Analysis, Non-Parametric Density Estimation and K-Nearest Neighbor Classification. - I. Arora; Faramarz Valafar (METMBS, 2003)

Comparison of Three Nonparametric Density Estimation Techniques Using Bayes' Classifiers Applied to Microarray Data Analysis. - Christopher A. Peters; Faramarz Valafar (METMBS, 2003)

Prediction of Sickle Cell Anemia Patient's Response to Hydroxyurea Treatment Using ARTMAP Network. - Hongyu Xu; Faramarz Valafar; Marko Vuskovic (METMBS, 2003)

VSTM: Virtual Stress Testing Machine. - R. Harris; A. M. Ausin; J. S. Angulo; Faramarz Valafar; T. Impelluso (PDPTA, 2004)

Scalability of VSTM: A Memory Model and Inter-Processor Communication Perspective. - Faramarz Valafar; R. Harris; A. M. Ausin; J. S. Angulo; T. Impelluso (PDPTA, 2004)

Reconstruction of Gene Regulatory Networks from Temporal Microarray Data Using Pattern Recognition Techniques. - Azhar Salim; Faramarz Valafar (IJCNN, 2006)

Bioinformatic analyses of mammalian 5'-UTR sequence properties of mRNAs predicts alternative translation initiation sites. - Jill L. Wegrzyn; Thomas M. Drudge; Faramarz Valafar; Vivian Hook (BMC Bioinform., 2008)

The G2 Project: Establishing A CSU "Grand Grid" for Scientific Computing in Research and Education. - Spiros H. Courellis; Katherine A. Kantardjieff; Robert Chun; Kimberly Cousins; Patrick Fleming; Nicholas Kioussis; Brooke Lustig; Dragutin Petkovic; Shantanu Sharma 003; William Thibault; Faramarz Valafar (Innovative Techniques in Instruction Technology, E-learning, E-assessment, and Education, 2008)

The Gene Wiki: community intelligence applied to human gene annotation. - Jon W. Huss III; Pierre Lindenbaum; Michael Martone; Donabel Roberts; Angel D. Pizarro; Faramarz Valafar; John B. Hogenesch; Andrew I. Su (Nucleic Acids Res., 2010)

Empirical comparison of cross-platform normalization methods for gene expression data. - Jason Rudy; Faramarz Valafar (BMC Bioinform., 2011)

Functional Connectivities Are More Informative Than Anatomical Variables in Diagnostic Classification of Autism. - Aina Eill; Afrooz Jahedi; Yangfeifei Gao; Jiwandeep S. Kohli; Christopher H. Fong; Seraphina Solders; Ruth A. Carper; Faramarz Valafar; Barbara A. Bailey; Ralph-Axel Müller (Brain Connect., 2019)

Identification of 1H-NMR Spectra of Xyloglucan Oligosaccharides: A Comparative Study of Artificial Neural Networks and Bayesian Classification Using Nonparametric Density Estimation. - Faramarz Valafar; Homayoun Valafar; William S. York (CoRR, 2020)

A Comparative study of Artificial Neural Networks Using Reinforcement learning and Multidimensional Bayesian Classification Using Parzen Density Estimation for Identification of GC-EIMS Spectra of Partially Methylated Alditol Acetates. - Faramarz Valafar; Homayoun Valafar (CoRR, 2020)

Reduction in the complexity of 1D 1H-NMR spectra by the use of Frequency to Information Transformation. - Homayoun Valafar; Faramarz Valafar (CoRR, 2020)

Parallel Implementation of Distributed Global Optimization (DGO). - Homayoun Valafar; Okan K. Ersoy; Faramarz Valafar (CoRR, 2020)

Quantifying Hierarchical Conflicts in Homology Statements. - Krister M. Swenson; Afif Elghraoui; Faramarz Valafar; Siavash Mirarab; Mathias Weller (RECOMB-CG, 2022)

Evaluating impacts of syntenic block detection strategies on rearrangement phylogeny using Mycobacterium tuberculosis isolates. - Afif Elghraoui; Siavash Mirarab; Krister M. Swenson; Faramarz Valafar (Bioinform., 2023)