iDIBS: An Improved Distributed Backup System. - Faruck Morcos; Thidapat Chantem; Philip Little; Tiago Gasiba; Douglas Thain (ICPADS (1), 2006)

On genomic coding theory. - Zaher Dawy; Pavol Hanus; Johanna Weindl; Janis Dingel; Faruck Morcos (Eur. Trans. Telecommun., 2007)

Predicting Protein-Protein Interactions from Protein Domains Using a Set Cover Approach. - Chengbang Huang; Faruck Morcos; Simon P. Kanaan; Stefan Wuchty; Danny Z. Chen; Jesús A. Izaguirre (IEEE ACM Trans. Comput. Biol. Bioinform., 2007)

Cytoprophet: a Cytoscape plug-in for protein and domain interaction networks inference. - Faruck Morcos; Charles Lamanna; Marcin Sikora; Jesús A. Izaguirre (Bioinform., 2008)

Addendum. Cytoprophet: a Cytoscape plug-in for protein and domain interaction networks inference. - Faruck Morcos; Charles Lamanna; Marcin Sikora; Jesús A. Izaguirre (Bioinform., 2008)

Determination of Specificity Residues in Two Component Systems using Graphlets. - Faruck Morcos; Charles Lamanna; Nitesh V. Chawla; Jesús A. Izaguirre (BIOCOMP, 2009)

Translation initiation modeling and mutational analysis based on the 3'-end of the Escherichia coli 16S rRNA sequence. - Zaher Dawy; Faruck Morcos; Johanna Weindl; Jakob C. Mueller (Biosyst., 2009)

Estimation of Protein and Domain Interactions in the Switching Motility System of Myxococcus Xanthus. - Faruck Morcos; Marcin Sikora; Mark S. Alber; Dale Kaiser; Jesús A. Izaguirre (Pacific Symposium on Biocomputing, 2010)

Modeling Conformational Ensembles of Slow Functional Motions in Pin1-WW. - Faruck Morcos; Santanu Chatterjee; Christopher L. McClendon; Paul R. Brenner; Roberto López-Rendón; John Zintsmaster; Mária Ercsey-Ravasz; Christopher R. Sweet; Matthew P. Jacobson; Jeffrey W. Peng; Jesús A. Izaguirre (PLoS Comput. Biol., 2010)

Belief propagation estimation of protein and domain interactions using the sum-product algorithm. - Faruck Morcos; Marcin Sikora; Mark S. Alber; Dale Kaiser; Jesús A. Izaguirre (IEEE Trans. Inf. Theory, 2010)

Designing Pooling Systems for Noisy High-Throughput Protein-Protein Interaction Experiments Using Boolean Compressed Sensing. - Ramy Mourad; Zaher Dawy; Faruck Morcos (IEEE ACM Trans. Comput. Biol. Bioinform., 2013)

Enhancing protein fold determination by exploring the complementary information of chemical cross-linking and coevolutionary signals. - Ricardo N. dos Santos; Allan J. R. Ferrari; Hugo C. R. de Jesus; Fábio C. Gozzo; Faruck Morcos; Leandro Martínez (Bioinform., 2018)

DCA-MOL: A PyMOL Plugin To Analyze Direct Evolutionary Couplings. - Aleksandra I. Jarmolinska; Qin Zhou; Joanna I. Sulkowska; Faruck Morcos (J. Chem. Inf. Model., 2019)

Information Theory in Molecular Evolution: From Models to Structures and Dynamics. - Faruck Morcos (Entropy, 2021)

ELIHKSIR Web Server: Evolutionary Links Inferred for Histidine Kinase Sensors Interacting with Response Regulators. - Claude Sinner; Cheyenne Ziegler; Yun Ho Jung; Xianli Jiang; Faruck Morcos (Entropy, 2021)