Learning Semantics-Enriched Representation via Self-discovery, Self-classification, and Self-restoration. - Fatemeh Haghighi; Mohammad Reza Hosseinzadeh Taher; Zongwei Zhou; Michael B. Gotway; Jianming Liang (MICCAI (1), 2020)

A Systematic Benchmarking Analysis of Transfer Learning for Medical Image Analysis. - Mohammad Reza Hosseinzadeh Taher; Fatemeh Haghighi; Ruibin Feng; Michael B. Gotway; Jianming Liang (DART/FAIR@MICCAI, 2021)

Stacking ensemble model of deep learning and its application to Persian/Arabic handwritten digits recognition. - Fatemeh Haghighi; Hesam Omranpour (Knowl. Based Syst., 2021)

Transferable Visual Words: Exploiting the Semantics of Anatomical Patterns for Self-Supervised Learning. - Fatemeh Haghighi; Mohammad Reza Hosseinzadeh Taher; Zongwei Zhou; Michael B. Gotway; Jianming Liang (IEEE Trans. Medical Imaging, 2021)

DiRA: Discriminative, Restorative, and Adversarial Learning for Self-supervised Medical Image Analysis. - Fatemeh Haghighi; Mohammad Reza Hosseinzadeh Taher; Michael B. Gotway; Jianming Liang (CVPR, 2022)

Benchmarking and Boosting Transformers for Medical Image Classification. - Dongao Ma; Mohammad Reza Hosseinzadeh Taher; Jiaxuan Pang; Nahid Ul Islam; Fatemeh Haghighi; Michael B. Gotway; Jianming Liang (DART@MICCAI, 2022)

POPAR: Patch Order Prediction and Appearance Recovery for Self-supervised Medical Image Analysis. - Jiaxuan Pang; Fatemeh Haghighi; Dongao Ma; Nahid Ul Islam; Mohammad Reza Hosseinzadeh Taher; Michael B. Gotway; Jianming Liang (DART@MICCAI, 2022)

CAiD: Context-Aware Instance Discrimination for Self-supervised Learning in Medical Imaging. - Mohammad Reza Hosseinzadeh Taher; Fatemeh Haghighi; Michael B. Gotway; Jianming Liang (MIDL, 2022)

Self-supervised Learning for Segmentation and Quantification of Dopamine Neurons in Parkinson's Disease. - Fatemeh Haghighi; Soumitra Ghosh; Sarah Chu; Hai Ngu; Mohsen Hejrati; Han Hui Lin; Baris Bingol; Somaye Hashemifar (Trans. Mach. Learn. Res., 2023)

Self-supervised learning for medical image analysis: Discriminative, restorative, or adversarial? - Fatemeh Haghighi; Mohammad Reza Hosseinzadeh Taher; Michael B. Gotway; Jianming Liang (Medical Image Anal., 2024)

Learning Anatomy-Disease Entangled Representation. - Fatemeh Haghighi; Michael B. Gotway; Jianming Liang (WACV, 2025)

RadEval: A framework for radiology text evaluation. - Justin Xu; Xi Zhang; Javid Abderezaei; Julie Bauml; Roger Boodoo; Fatemeh Haghighi; Ali Ganjizadeh; Eric Brattain; Dave Van Veen; Zaiqiao Meng; David Eyre; Jean-Benoit Delbrouck (CoRR, 2025)