DeNovo: virus-host sequence-based protein-protein interaction prediction. - Fatma-Elzahraa Eid; Mahmoud ElHefnawi; Lenwood S. Heath (Bioinform., 2016)

PEAK: Integrating Curated and Noisy Prior Knowledge in Gene Regulatory Network Inference. - Doaa Altarawy; Fatma-Elzahraa Eid; Lenwood S. Heath (J. Comput. Biol., 2017)