Algorithm-driven Artifacts in median polish summarization of Microarray data. - Federico M. Giorgi; Anthony M. Bolger; Marc Lohse; Björn Usadel (BMC Bioinform., 2010)

The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability. - Jing-Woei Li; Dan M. Bolser; Magnus Manske; Federico Manuel Giorgi; Nikolay Vyahhi; Björn Usadel; Bernardo J. Clavijo; Ting-Fung Chan; Nathalie Wong; Daniel R. Zerbino; Maria Victoria Schneider (Briefings Bioinform., 2013)

Comparative study of RNA-seq- and Microarray-derived coexpression networks in Arabidopsis thaliana. - Federico M. Giorgi; Cristian Del Fabbro; Francesco Licausi (Bioinform., 2013)

Detection and removal of spatial bias in multiwell assays. - Alexander Lachmann; Federico M. Giorgi; Mariano J. Alvarez; Andrea Califano (Bioinform., 2016)

ARACNe-AP: gene network reverse engineering through adaptive partitioning inference of mutual information. - Alexander Lachmann; Federico M. Giorgi; Gonzalo López; Andrea Califano (Bioinform., 2016)

Spathial: an R package for the evolutionary analysis of biological data. - Erika Gardini; Federico M. Giorgi; Sergio Decherchi; Andrea Cavalli (Bioinform., 2020)

corto: a lightweight R package for gene network inference and master regulator analysis. - Daniele Mercatelli; Gonzalo Lopez-Garcia; Federico M. Giorgi (Bioinform., 2020)

Web tools to fight pandemics: the COVID-19 experience. - Daniele Mercatelli; Andrew N. Holding; Federico M. Giorgi (Briefings Bioinform., 2021)

svpluscnv: analysis and visualization of complex structural variation data. - Gonzalo López; Laura E. Egolf; Federico M. Giorgi; Sharon J. Diskin; Adam A. Margolin (Bioinform., 2021)

Detection of pan-cancer surface protein biomarkers via a network-based approach on transcriptomics data. - Daniele Mercatelli; Chiara Cabrelle; Pierangelo Veltri; Federico M. Giorgi; Pietro H. Guzzi (Briefings Bioinform., 2022)