Dynamic Looping of a Free-Draining Polymer. - Felix X.-F. Ye; Panos Stinis; Hong Qian (SIAM J. Appl. Math., 2018)

Synchronization in Discrete-Time, Discrete-State Random Dynamical Systems. - Wen Huang; Hong Qian; Shirou Wang; Felix X.-F. Ye; Yingfei Yi (SIAM J. Appl. Dyn. Syst., 2020)

ISALT: Inference-based schemes adaptive to large time-stepping for locally Lipschitz ergodic systems. - Xingjie Li 001; Fei Lu 016; Felix X.-F. Ye (CoRR, 2021)

Nonlinear model reduction for slow-fast stochastic systems near manifolds. - Felix X.-F. Ye; Sichen Yang; Mauro Maggioni (CoRR, 2021)

NySALT: Nyström-type inference-based schemes adaptive to large time-stepping. - Xingjie Li 001; Fei Lu 016; Molei Tao; Felix X.-F. Ye (J. Comput. Phys., 2023)

Robust First and Second-Order Differentiation for Regularized Optimal Transport. - Xingjie Li 001; Fei Lu 016; Molei Tao; Felix X.-F. Ye (CoRR, 2024)

Nonlinear Model Reduction for Slow-Fast Stochastic Systems Near Unknown Invariant Manifolds. - Felix X.-F. Ye; Sichen Yang; Mauro Maggioni (J. Nonlinear Sci., 2024)

Robust First- and Second-Order Differentiation for Regularized Optimal Transport. - Xingjie Li; Fei Lu; Molei Tao; Felix X.-F. Ye (SIAM J. Sci. Comput., 2025)

Diffuse Everything: Multimodal Diffusion Models on Arbitrary State Spaces. - Kevin Rojas; Yuchen Zhu; Sichen Zhu; Felix X.-F. Ye; Molei Tao (CoRR, 2025)