ZCURVE_V: a new self-training system for recognizing protein-coding genes in viral and phage genomes. - Feng-Biao Guo; Chun-Ting Zhang (BMC Bioinform., 2006)

MimoDB 2.0: a mimotope database and beyond. - Jian Huang 004; Beibei Ru; Ping Zhu 002; Fulei Nie; Jun Yang; Xuyang Wang; Ping Dai; Hao Lin 001; Feng-Biao Guo; Nini Rao (Nucleic Acids Res., 2012)

IFIM: a database of integrated fitness information for microbial genes. - Wen Wei; Yuan-Nong Ye; Sen Luo; Yan-Yan Deng; Dan Lin; Feng-Biao Guo (Database J. Biol. Databases Curation, 2014)

Phd7faster: Predicting Clones Propagating Faster from the pH.D.-7 phage Display peptide Library. - Beibei Ru; Peter A. C. 't Hoen; Fulei Nie; Hao Lin 001; Feng-Biao Guo; Jian Huang 004 (J. Bioinform. Comput. Biol., 2014)

Applications of four machine learning algorithms in identifying bacterial essential genes based on composition features. - Yan-Yan Deng; Feng-Biao Guo (ChinaSIP, 2015)

ZCURVE 3.0: identify prokaryotic genes with higher accuracy as well as automatically and accurately select essential genes. - Zhigang Hua; Yan Lin; Yazhou Yuan; Dechang Yang; Wen Wei; Feng-Biao Guo (Nucleic Acids Res., 2015)

Predicting bacteriophage proteins located in host cell with feature selection technique. - Hui Ding 005; Zhi-Yong Liang; Feng-Biao Guo; Jian Huang 004; Wei Chen 064; Hao Lin 001 (Comput. Biol. Medicine, 2016)

Modified bagging of maximal information coefficient for genome-wide identification. - Han-Ming Liu; Nini Rao; Dan Yang; Ling Yang; Yi Li; Feng-Biao Guo (Int. J. Data Min. Bioinform., 2016)

ACFIS: a web server for fragment-based drug discovery. - Ge-Fei Hao; Wen Jiang; Yuan-Nong Ye; Feng-Xu Wu; Xiao-Lei Zhu; Feng-Biao Guo; Guangfu Yang (Nucleic Acids Res., 2016)

BDB: biopanning data bank. - Bifang He; Guoshi Chai; Yaocong Duan; Zhiqiang Yan; Liuyang Qiu; Huixiong Zhang; Zechun Liu; Qiang He; Ke Han; Beibei Ru; Feng-Biao Guo; Hui Ding 005; et al. (Nucleic Acids Res., 2016)

Zisland Explorer: detect genomic islands by combining homogeneity and heterogeneity properties. - Wen Wei; Feng Gao 001; Meng-Ze Du; Hong-Li Hua; Ju Wang; Feng-Biao Guo (Briefings Bioinform., 2017)

Accurate prediction of human essential genes using only nucleotide composition and association information. - Feng-Biao Guo; Chuan Dong; Hong-Li Hua; Shuo Liu; Hao Luo; Hong-Wan Zhang; Yan-Ting Jin; Kai-Yue Zhang (Bioinform., 2017)

SSER: Species specific essential reactions database. - Abraham A. Labena; Yuan-Nong Ye; Chuan Dong; Fa-Zhan Zhang; Feng-Biao Guo (BMC Syst. Biol., 2017)

The 7th National Conference on Bioinformatics and Systems Biology of China. - Zhirong Sun; Kui Hua; Xuegong Zhang; Feng-Biao Guo; Jian Huang 004 (Quant. Biol., 2017)

Anti-CRISPRdb: a comprehensive online resource for anti-CRISPR proteins. - Chuan Dong; Ge-Fei Hao; Hong-Li Hua; Shuo Liu; Abraham A. Labena; Guoshi Chai; Jian Huang 004; Nini Rao; Feng-Biao Guo (Nucleic Acids Res., 2018)

Metabolic pathway databases and model repositories. - Abraham A. Labena; Yi-Zhou Gao; Chuan Dong; Hong-Li Hua; Feng-Biao Guo (Quant. Biol., 2018)

CasPDB: an integrated and annotated database for Cas proteins from bacteria and archaea. - Zhongjie Tang; ShaoQi Chen; Ang Chen; Bifang He; Yuwei Zhou; Guoshi Chai; Feng-Biao Guo; Jian Huang 004 (Database J. Biol. Databases Curation, 2019)

RIscoper: a tool for RNA-RNA interaction extraction from the literature. - Yang Zhang 125; Tianyuan Liu; Liqun Chen; Jinxurong Yang; Jiayi Yin; Yuncong Zhang; Zhixi Yun; Hao Xu; Lin Ning 002; Feng-Biao Guo; Yongshuai Jiang; Hao Lin 001; et al. (Bioinform., 2019)

Guest Editorial for Special Section on the 7th National Conference on Bioinformatics and Systems Biology of China. - Feng-Biao Guo; Xinglai Ji; Jian Huang 004 (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

Identifying Bacterial Essential Genes Based on a Feature-Integrated Method. - Yan Lin; Fa-Zhan Zhang; Kai Xue; Yi-Zhou Gao; Feng-Biao Guo (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

Comprehensive review of the identification of essential genes using computational methods: focusing on feature implementation and assessment. - Chuan Dong; Yan-Ting Jin; Hong-Li Hua; Qing-Feng Wen; Sen Luo; Wen-Xin Zheng; Feng-Biao Guo (Briefings Bioinform., 2020)

CEG 2.0: an updated database of clusters of essential genes including eukaryotic organisms. - Shuo Liu; Shu-Xuan Wang; Wei Liu; Chen Wang; Fa-Zhan Zhang; Yuan-Nong Ye; Candy-S. Wu; Wen-Xin Zheng; Nini Rao; Feng-Biao Guo (Database J. Biol. Databases Curation, 2020)

Anti-CRISPRdb v2.2: an online repository of anti-CRISPR proteins including information on inhibitory mechanisms, activities and neighbors of curated anti-CRISPR proteins. - Chuan Dong; Xin Wang; Cong Ma; Zhi Zeng; Dong-Kai Pu; Shuo Liu; Candy-S. Wu; Shixin Chen; Zixin Deng; Feng-Biao Guo (Database J. Biol. Databases Curation, 2022)

Mslar: Microbial synthetic lethal and rescue database. - Senbin Zhu; Qian-Hu Jiang; Zhi-Guo Chen; Xiang Zhou; Yan-Ting Jin; Zixin Deng; Feng-Biao Guo (PLoS Comput. Biol., 2023)

Carmna: classification and regression models for nitrogenase activity based on a pretrained large protein language model. - Anqiang Ye; Ji-Yun Zhang; Qian Xu; Hai-Xia Guo; Zhen Liao; Hongtu Cui; Dongdong Zhang; Feng-Biao Guo (Briefings Bioinform., 2024)

Systematic identification of cancer-type-specific drugs based on essential genes and validations in lung adenocarcinoma. - Xiang Lian; Xia Kuang; Dong-Dong Zhang; Qian Xu; Anqiang Ye; Cheng-Yu Wang; Hong-Tu Cui; Hai-Xia Guo; Ji-Yun Zhang; Yuan Liu; Ge-Fei Hao; Zhenshun Cheng; et al. (Briefings Bioinform., 2025)