Exploring the effectiveness of the TSR-based protein 3-D structural comparison method for protein clustering, and structural motif identification and discovery of protein kinases, hydrolases, and SARS-CoV-2's protein via the application of amino acid grouping. - Titli Sarkar; Vijay V. Raghavan 001; Feng Chen 043; Andrew Riley; Sophia Zhou; Wu Xu (Comput. Biol. Chem., 2021)

Introducing mirror-image discrimination capability to the TSR-based method for capturing stereo geometry and understanding hierarchical structure relationships of protein receptor family. - Titli Sarkar; Yuwu Chen; Yu Wang 197; Yixin Chen; Feng Chen 043; Camille R. Reaux; Laura E. Moore; Vijay Raghavan 001; Wu Xu (Comput. Biol. Chem., 2023)