A Bayesian Framework to Identify Methylcytosines from High-Throughput Bisulfite Sequencing Data. - Qing Xie; Qi Liu; Fengbiao Mao; Wanshi Cai; Honghu Wu; Mingcong You; Zhen Wang; Bingyu Chen 002; Zhongsheng Sun; Jinyu Wu (PLoS Comput. Biol., 2014)

RBP-Var: a database of functional variants involved in regulation mediated by RNA-binding proteins. - Fengbiao Mao; Luoyuan Xiao; Xianfeng Li; Jialong Liang; Huajing Teng; Wanshi Cai; Zhongsheng Sun (Nucleic Acids Res., 2016)

CirGRDB: a database for the genome-wide deciphering circadian genes and regulators. - Xianfeng Li; Leisheng Shi; Kun Zhang; Wenqing Wei; Qi Liu; Fengbiao Mao; Jinchen Li; Wanshi Cai; Huiqian Chen; Huajing Teng; Jiada Li; Zhongsheng Sun (Nucleic Acids Res., 2018)

EpiDenovo: a platform for linking regulatory de novo mutations to developmental epigenetics and diseases. - Fengbiao Mao; Qi Liu; Xiaolu Zhao; Haonan Yang; Sen Guo; Luoyuan Xiao; Xianfeng Li; Huajing Teng; Zhongsheng Sun; Yali Dou (Nucleic Acids Res., 2018)

OncoBase: a platform for decoding regulatory somatic mutations in human cancers. - Xianfeng Li; Leisheng Shi; Yan Wang; Jianing Zhong; Xiaolu Zhao; Huajing Teng; Xiaohui Shi; Haonan Yang; Shasha Ruan; MingKun Li; Zhongsheng Sun; Qimin Zhan; et al. (Nucleic Acids Res., 2019)

OncoVar: an integrated database and analysis platform for oncogenic driver variants in cancers. - Tao Wang; Shasha Ruan; Xiaolu Zhao; Xiaohui Shi; Huajing Teng; Jianing Zhong; Mingcong You; Kun Xia; Zhongsheng Sun; Fengbiao Mao (Nucleic Acids Res., 2021)

Comprehensive evaluation of computational methods for predicting cancer driver genes. - Xiaohui Shi; Huajing Teng; Leisheng Shi; Wenjian Bi; Wenqing Wei; Fengbiao Mao; Zhongsheng Sun (Briefings Bioinform., 2022)

CircleBase: an integrated resource and analysis platform for human eccDNAs. - Xiaolu Zhao; Leisheng Shi; Shasha Ruan; Wenjian Bi; Yifan Chen; Lin Chen; Yifan Liu; MingKun Li; Jie Qiao; Fengbiao Mao (Nucleic Acids Res., 2022)

Annotation and evaluation of base editing outcomes in multiple cell types using CRISPRbase. - Jibiao Fan; Leisheng Shi; Qi Liu; Zhipeng Zhu; Fan Wang; Runxian Song; Jimeng Su; Degui Zhou; Xiao Chen; Kailong Li; Lixiang Xue; Lichao Sun; et al. (Nucleic Acids Res., 2023)