GENCODE reference annotation for the human and mouse genomes. - Adam Frankish; Mark Diekhans; Anne-Maud Ferreira; Rory Johnson; Irwin Jungreis; Jane E. Loveland; Jonathan M. Mudge; Cristina Sisu; James C. Wright; Joel Armstrong; If Barnes; Andrew E. Berry; et al. (Nucleic Acids Res., 2019)

An analysis of tissue-specific alternative splicing at the protein level. - José Manuel Rodriguez; Fernando Pozo; Tomás Di Domenico; Jesús Vázquez; Michael L. Tress (PLoS Comput. Biol., 2020)

GENCODE 2021. - Adam Frankish; Mark Diekhans; Irwin Jungreis; Julien Lagarde; Jane E. Loveland; Jonathan M. Mudge; Cristina Sisu; James C. Wright; Joel Armstrong; If Barnes; Andrew E. Berry; Alexandra Bignell; et al. (Nucleic Acids Res., 2021)

APPRIS principal isoforms and MANE Select transcripts define reference splice variants. - Fernando Pozo; José Manuel Rodriguez; Laura Martínez Gómez; Jesús Vázquez; Michael L. Tress (Bioinform., 2022)

APPRIS: selecting functionally important isoforms. - José Manuel Rodriguez; Fernando Pozo; Daniel Cerdán-Vélez; Tomás Di Domenico; Jesús Vázquez; Michael L. Tress (Nucleic Acids Res., 2022)

GENCODE: reference annotation for the human and mouse genomes in 2023. - Adam Frankish; Silvia Carbonell Sala; Mark Diekhans; Irwin Jungreis; Jane E. Loveland; Jonathan M. Mudge; Cristina Sisu; James C. Wright; Carme Arnan; If Barnes; Abhimanyu Banerjee; Ruth Bennett; et al. (Nucleic Acids Res., 2023)