Generalising sequence models for epigenome predictions with tissue and assay embeddings. - Jacob Deasy; Ron Schwessinger; Ferran Gonzalez; Stephen Young; Kim M. Branson (CoRR, 2023)

Fine-tuning Protein Language Models with Deep Mutational Scanning improves Variant Effect Prediction. - Aleix Lafita; Ferran Gonzalez; Mahmoud Hossam; Paul Smyth; Jacob Deasy; Ari Allyn-Feuer; Daniel Seaton; Stephen Young (CoRR, 2024)