Generating functional protein variants with variational autoencoders. - Alex Hawkins-Hooker; Florence Depardieu; Sebastien Baur; Guillaume Couairon; Arthur Chen; David Bikard (PLoS Comput. Biol., 2021)

Computational design of novel Cas9 PAM-interacting domains using evolution-based modelling and structural quality assessment. - Cyril Malbranke; William Rostain; Florence Depardieu; Simona Cocco; Rémi Monasson; David Bikard (PLoS Comput. Biol., 2023)