Moderated effect size and P-value combinations for microarray meta-analyses. - Guillemette Marot; Jean-Louis Foulley; Claus-Dieter Mayer; Florence Jaffrézic (Bioinform., 2009)

A structural mixed model to shrink covariance matrices for time-course differential gene expression studies. - Guillemette Marot; Jean-Louis Foulley; Florence Jaffrézic (Comput. Stat. Data Anal., 2009)

Estimation in the probit normal model for binary outcomes using the SAEM algorithm. - Cristian Meza; Florence Jaffrézic; Jean-Louis Foulley (Comput. Stat. Data Anal., 2009)

Modelling and estimating heterogeneous variances in threshold models for ordinal discrete data via Winbugs/Openbugs. - Jean-Louis Foulley; Florence Jaffrézic (Comput. Methods Programs Biomed., 2010)

Reverse engineering gene regulatory networks using approximate Bayesian computation. - Andrea Rau; Florence Jaffrézic; Jean-Louis Foulley; Rebecca W. Doerge (Stat. Comput., 2012)

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis. - Marie-Agnès Dillies; Andrea Rau; Julie Aubert; Christelle Hennequet-Antier; Marine Jeanmougin; Nicolas Servant; Céline Keime; Guillemette Marot; David Castel; Jordi Estelle; Gregory Guernec; Bernd Jagla; et al. (Briefings Bioinform., 2013)

Data-based filtering for replicated high-throughput transcriptome sequencing experiments. - Andrea Rau; Mélina Gallopin; Gilles Celeux; Florence Jaffrézic (Bioinform., 2013)

Joint estimation of causal effects from observational and intervention gene expression data. - Andrea Rau; Florence Jaffrézic; Grégory Nuel (BMC Syst. Biol., 2013)

Differential meta-analysis of RNA-seq data from multiple studies. - Andrea Rau; Guillemette Marot; Florence Jaffrézic (BMC Bioinform., 2014)

Estimation d'effets causaux dans les réseaux de régulation génique. Vers la grande dimension. - Gilles Monneret; Florence Jaffrézic; Andrea Rau; Grégory Nuel (Rev. d'Intelligence Artif., 2015)

Fast tree aggregation for consensus hierarchical clustering. - Audrey Hulot; Julien Chiquet; Florence Jaffrézic; Guillem Rigaill (BMC Bioinform., 2020)

A unified framework for the integration of multiple hierarchical clusterings or networks from multi-source data. - Audrey Hulot; Denis Laloë; Florence Jaffrézic (BMC Bioinform., 2021)