Modelling Bacterial Genomes Using Hidden Markov Models. - Florence Muri (COMPSTAT, 1998)

Searching gene transfers on Bacillus subtilis using hidden Markov models. - Laurent Bize; Florence Muri; Franck Samson; François Rodolphe; S. Dusko Ehrlich; Bernard Prun; Philippe Bessières (RECOMB, 1999)

A Reversible Jump Markov Chain Monte Carlo Algorithm for Bacterial Promoter Motifs Discovery. - Pierre Nicolas; Anne-Sophie Tocquet; Vincent Miele; Florence Muri (J. Comput. Biol., 2006)