MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks. - Ludovic Cottret; David Wildridge; Florence Vinson; Michael P. Barrett; Hubert Charles; Marie-France Sagot; Fabien Jourdan (Nucleic Acids Res., 2010)

TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei. - Sanu Shameer; Flora J. Logan-Klumpler; Florence Vinson; Ludovic Cottret; Benjamin Merlet; Fiona Achcar; Michael Boshart; Matthew Berriman; Rainer Breitling; Frédéric Bringaud; Peter Bütikofer; Amy M. Cattanach; et al. (Nucleic Acids Res., 2015)

MetExploreViz: web component for interactive metabolic network visualization. - Maxime Chazalviel; Clément Frainay; Nathalie Poupin; Florence Vinson; Benjamin Merlet; Yoann Gloaguen; Ludovic Cottret; Fabien Jourdan (Bioinform., 2018)

MetExplore: collaborative edition and exploration of metabolic networks. - Ludovic Cottret; Clément Frainay; Maxime Chazalviel; Floréal Cabanettes; Yoann Gloaguen; Etienne Camenen; Benjamin Merlet; Stéphanie Heux; Jean-Charles Portais; Nathalie Poupin; Florence Vinson; Fabien Jourdan (Nucleic Acids Res., 2018)

MetaboRank: network-based recommendation system to interpret and enrich metabolomics results. - Clément Frainay; Sandrine Aros; Maxime Chazalviel; Thomas Garcia; Florence Vinson; Nicolas Weiss; Benoit Colsch; Frédéric Sedel; Dominique Thabut; Christophe Junot; Fabien Jourdan (Bioinform., 2019)

FORUM: building a Knowledge Graph from public databases and scientific literature to extract associations between chemicals and diseases. - Maxime Delmas; Olivier Filangi; Nils Paulhe; Florence Vinson; Christophe Duperier; William Garrier; Paul-Emeric Saunier; Yoann Pitarch; Fabien Jourdan; Franck Giacomoni; Clément Frainay (Bioinform., 2021)

Pathway analysis in metabolomics: Recommendations for the use of over-representation analysis. - Cecilia Wieder; Clément Frainay; Nathalie Poupin; Pablo Rodríguez-Mier; Florence Vinson; Juliette Cooke; Rachel P. J. Lai; Jacob G. Bundy; Fabien Jourdan; Timothy M. D. Ebbels (PLoS Comput. Biol., 2021)

Genome scale metabolic network modelling for metabolic profile predictions. - Juliette Cooke; Maxime Delmas; Cecilia Wieder; Pablo Rodríguez-Mier; Clément Frainay; Florence Vinson; Timothy M. D. Ebbels; Nathalie Poupin; Fabien Jourdan (PLoS Comput. Biol., 2024)