eCOMPAGT - efficient Combination and Management of Phenotypes and Genotypes for Genetic Epidemiology. - Sebastian Schönherr; Hansi Weißensteiner; Stefan Coassin; Günther Specht; Florian Kronenberg; Anita Brandstätter (BMC Bioinform., 2009)

CONAN: copy number variation analysis software for genome-wide association studies. - Lukas Forer; Sebastian Schönherr; Hansi Weißensteiner; Florian Haider; Thomas Kluckner; Christian Gieger; Heinz-Erich Wichmann; Günther Specht; Florian Kronenberg; Anita Kloss-Brandstätter (BMC Bioinform., 2010)

eCOMPAGT integrates mtDNA: import, validation and export of mitochondrial DNA profiles for population genetics, tumour dynamics and genotype-phenotype association studies. - Hansi Weißensteiner; Sebastian Schönherr; Günther Specht; Florian Kronenberg; Anita Brandstätter (BMC Bioinform., 2010)

A feedback guided interface for elastic computing. - Sebastian Schönherr; Lukas Forer; Hansi Weißensteiner; Florian Kronenberg; Günther Specht; Anita Kloss-Brandstätter (Grundlagen von Datenbanken, 2011)

Cloudgene: A graphical execution platform for MapReduce programs on private and public clouds. - Sebastian Schönherr; Lukas Forer; Hansi Weißensteiner; Florian Kronenberg; Günther Specht; Anita Kloss-Brandstätter (BMC Bioinform., 2012)

Delivering bioinformatics MapReduce applications in the cloud. - Lukas Forer; Tomislav Lipic; Sebastian Schönherr; Hansi Weißensteiner; Davor Davidovic; Florian Kronenberg; Enis Afgan (MIPRO, 2014)

Cloudflow - A framework for MapReduce pipeline development in Biomedical Research. - Lukas Forer; Enis Afgan; Hansi Weißensteiner; Davor Davidovic; Günther Specht; Florian Kronenberg; Sebastian Schönherr (MIPRO, 2015)

EasyStrata: evaluation and visualization of stratified genome-wide association meta-analysis data. - Thomas W. Winkler; Zoltán Kutalik; Mathias Gorski; Claudio Lottaz; Florian Kronenberg; Iris M. Heid (Bioinform., 2015)

mtDNA-Server: next-generation sequencing data analysis of human mitochondrial DNA in the cloud. - Hansi Weißensteiner; Lukas Forer; Christian Fuchsberger; Bernd Schöpf; Anita Kloss-Brandstätter; Günther Specht; Florian Kronenberg; Sebastian Schönherr (Nucleic Acids Res., 2016)

HaploGrep 2: mitochondrial haplogroup classification in the era of high-throughput sequencing. - Hansi Weißensteiner; Dominic Pacher; Anita Kloss-Brandstätter; Lukas Forer; Günther Specht; Hans-Jürgen Bandelt; Florian Kronenberg; Antonio Salas; Sebastian Schönherr (Nucleic Acids Res., 2016)

Cloudflow - enabling faster biomedical pipelines with MapReduce and Spark. - Lukas Forer; Enis Afgan; Hansi Weißensteiner; Davor Davidovic; Günther Specht; Florian Kronenberg; Sebastian Schönherr (Scalable Comput. Pract. Exp., 2016)

Haplogrep 3 - an interactive haplogroup classification and analysis platform. - Sebastian Schönherr; Hansi Weißensteiner; Florian Kronenberg; Lukas Forer (Nucleic Acids Res., 2023)

KidneyGPS: a user-friendly web application to help prioritize kidney function genes and variants based on evidence from genome-wide association studies. - Kira J. Stanzick; Klaus J. Stark; Mathias Gorski; Johannes Schödel; René Krüger; Florian Kronenberg; Richard Warth; Iris M. Heid; Thomas W. Winkler (BMC Bioinform., 2023)