AutoDock Bias: improving binding mode prediction and virtual screening using known protein-ligand interactions. - Juan Pablo Arcon; Carlos P. Modenutti; Demian Avendaño; Elias D. López; Lucas A. Defelipe; Francesca Alessandra Ambrosio; Adrian Gustavo Turjanski; Stefano Forli; Marcelo A. Marti (Bioinform., 2019)

Comparison of affinity ranking using AutoDock-GPU and MM-GBSA scores for BACE-1 inhibitors in the D3R Grand Challenge 4. - Lea El-Khoury; Diogo Santos-Martins; Sukanya Sasmal; Jérôme Eberhardt; Giulia Bianco; Francesca Alessandra Ambrosio; Leonardo Solis-Vasquez; Andreas Koch 001; Stefano Forli; David L. Mobley (J. Comput. Aided Mol. Des., 2019)

D3R Grand Challenge 4: prospective pose prediction of BACE1 ligands with AutoDock-GPU. - Diogo Santos-Martins; Jérôme Eberhardt; Giulia Bianco; Leonardo Solis-Vasquez; Francesca Alessandra Ambrosio; Andreas Koch 001; Stefano Forli (J. Comput. Aided Mol. Des., 2019)

Targeting SARS-CoV-2 Main Protease: A Successful Story Guided by an In Silico Drug Repurposing Approach. - Francesca Alessandra Ambrosio; Giosuè Costa; Isabella Romeo; Francesca Esposito; Mohammad Alkhatib; Romina Salpini; Valentina Svicher; Angela Corona; Paolo Malune; Enzo Tramontano; Francesca Ceccherini-Silberstein; Stefano Alcaro; et al. (J. Chem. Inf. Model., 2023)