A Common Reference Framework for Analyzing/Comparing Proteins and Ligands. Fingerprints for Ligands And Proteins (FLAP): Theory and Application. - Massimo Baroni; Gabriele Cruciani; Simone Sciabola; Francesca Perruccio; Jonathan S. Mason (J. Chem. Inf. Model., 2007)

HPPD: Ligand- and Target-Based Virtual Screening on a Herbicide Target. - Miriam López-Ramos; Francesca Perruccio (J. Chem. Inf. Model., 2010)

High-Throughput Virtual Screening of Proteins Using GRID Molecular Interaction Fields. - Simone Sciabola; Robert V. Stanton; James E. J. Mills; Maria M. Flocco; Massimo Baroni; Gabriele Cruciani; Francesca Perruccio; Jonathan S. Mason (J. Chem. Inf. Model., 2010)