New graphic representation of structural parameters of proteins. - Francesco Facchiano; Antonio Facchiano; R. Ragone; Giovanni Colonna (Comput. Appl. Biosci., 1988)

FAST (Flexible Analysis by Software Tool) and CHAMP (CHemico-physical AMinoacidic Parameter data bank): a new tool to investigate protein structure. - Antonio Facchiano; Francesco Facchiano; R. Ragone; Giovanni Colonna (Comput. Appl. Biosci., 1989)

Converter: a program to convert crystallographic coordinates among different molecular graphics standards on PC-IBM platforms. - Antonio Facchiano; Francesco Facchiano; R. Ragone; Giovanni Colonna (Comput. Appl. Biosci., 1991)

Active Sequences Collection (ASC) database: a new tool to assign functions to protein sequences. - Angelo M. Facchiano; Antonio Facchiano; Francesco Facchiano (Nucleic Acids Res., 2003)

A Computational Strategy to Investigate Relevant Similarities between Virus and Human Proteins - Local High Similarities between Herpes and Human Proteins. - Anna Marabotti; Corrado Cirielli; Daniela Agnese D'Arcangelo; Claudia Giampietri; Francesco Facchiano; Angelo M. Facchiano; Antonio Facchiano (BIOINFORMATICS, 2011)