Gene Networks Validation based on Metabolic Pathways. - Francisco Gómez-Vela; Norberto Díaz-Díaz; Jesús S. Aguilar-Ruiz (BIBE, 2011)

Pattern Recognition in Biological Time Series. - Francisco Gómez-Vela; Francisco Martínez-Álvarez; Carlos D. Barranco; Norberto Díaz-Díaz; Domingo S. Rodríguez-Baena; Jesús S. Aguilar-Ruiz (CAEPIA, 2011)

Gene Regulatory Networks Validation Framework Based in KEGG. - Norberto Díaz-Díaz; Francisco Gómez-Vela; Domingo S. Rodríguez-Baena; Jesús S. Aguilar-Ruiz (HAIS (2), 2011)

Gene-gene interaction based clustering method for microarray data. - Norberto Díaz-Díaz; Francisco Gómez-Vela; Jesús S. Aguilar-Ruiz; Jorge García-Gutiérrez (ISDA, 2011)

Gene network coherence based on prior knowledge using direct and indirect relationships. - Francisco Gómez-Vela; José Antonio Lagares; Norberto Díaz-Díaz (Comput. Biol. Chem., 2015)

Incorporating biological knowledge for construction of fuzzy networks of gene associations. - Francisco Gómez-Vela; Carlos D. Barranco; Norberto Díaz-Díaz (Appl. Soft Comput., 2016)

High-dimensional feature selection via feature grouping: A Variable Neighborhood Search approach. - Miguel García-Torres; Francisco Gómez-Vela; Belén Melián-Batista; J. Marcos Moreno-Vega (Inf. Sci., 2016)

Bioinformatics from a Big Data Perspective: Meeting the Challenge. - Francisco Gómez-Vela; Aurelio López; José Antonio Lagares; Domingo S. Baena; Carlos D. Barranco; Miguel García-Torres; Federico Divina (IWBBIO (2), 2017)

GFD-Net: A novel semantic similarity methodology for the analysis of gene networks. - Juan J. Diaz-Montana; Norberto Díaz-Díaz; Francisco Gómez-Vela (J. Biomed. Informatics, 2017)

Analysis of Relevance and Redundance on Topoisomerase 2b (TOP2B) Binding Sites: A Feature Selection Approach. - Pedro Manuel Martínez García; Miguel García-Torres; Federico Divina; Francisco Antonio Gómez Vela; Felipe Cortés-Ledesma (EvoApplications, 2018)

GNC-app: A new Cytoscape app to rate gene networks biological coherence using gene-gene indirect relationships. - Juan J. Diaz-Montana; Francisco Gómez-Vela; Norberto Díaz-Díaz (Biosyst., 2018)

BIGO: A web application to analyse gene enrichment analysis results. - Aurelio López-Fernández; Domingo S. Rodríguez-Baena; Francisco Gómez-Vela; Norberto Díaz-Díaz (Comput. Biol. Chem., 2018)

Structure Optimization for Large Gene Networks Based on Greedy Strategy. - Francisco Gómez-Vela; Domingo S. Rodríguez-Baena; Jose Luis Vazquez Noguera (Comput. Math. Methods Medicine, 2018)

Analysis of Student Achievement Scores: A Machine Learning Approach. - Miguel García-Torres; David Becerra-Alonso; Francisco Antonio Gómez Vela; Federico Divina; Isabel López-Cobo; Francisco Martínez-Álvarez (CISIS-ICEUTE, 2019)

Computational methods for Gene Regulatory Networks reconstruction and analysis: A review. - Fernando M. Delgado-Chaves; Francisco Gómez-Vela (Artif. Intell. Medicine, 2019)

Ensemble and Greedy Approach for the Reconstruction of Large Gene Co-Expression Networks. - Francisco Gómez-Vela; Fernando M. Delgado-Chaves; Domingo S. Rodríguez-Baena; Miguel García-Torres; Federico Divina (Entropy, 2019)

Analysis of Student Achievement Scores via Cluster Analysis. - Viviana Elizabeth Jiménez Chaves; Miguel García-Torres; David Becerra-Alonso; Francisco Gómez-Vela; Federico Divina; Jose Luis Vazquez Noguera (ICEUTE, 2020)

Identifying livestock behavior patterns based on accelerometer dataset. - Domingo S. Rodríguez-Baena; Francisco Gómez-Vela; Miguel García-Torres; Federico Divina; Carlos D. Barranco; Norberto Díaz-Díaz; Manuel Jiménez; Gema Montalvo (J. Comput. Sci., 2020)

Scatter search for high-dimensional feature selection using feature grouping. - Miguel García-Torres; Francisco Gómez-Vela; Federico Divina; Diego P. Pinto-Roa; José Luis Vázquez Noguera; Julio César Mello Román (GECCO Companion, 2021)

Forecasting Electricity Consumption Data from Paraguay Using a Machine Learning Approach. - José A. Gallardo; Miguel García-Torres; Francisco Gómez-Vela; Félix Morales; Federico Divina; David Becerra-Alonso; Gustavo Velázquez; Federico Daumas-Ladouce; José Luis Vázquez Noguera; Carlos Sauer Ayala; Diego P. Pinto-Roa; Pedro E. Gardel-Sotomayor; et al. (SOCO, 2021)

A multi-GPU biclustering algorithm for binary datasets. - Aurelio López-Fernández; Domingo S. Rodríguez-Baena; Francisco Gómez-Vela; Federico Divina; Miguel García-Torres (J. Parallel Distributed Comput., 2021)

Technical analysis strategy optimization using a machine learning approach in stock market indices. - Jordan Ayala; Miguel García-Torres; José Luis Vázquez Noguera; Francisco Gómez-Vela; Federico Divina (Knowl. Based Syst., 2021)

Genome-wide prediction of topoisomerase IIβ binding by architectural factors and chromatin accessibility. - Pedro Manuel Martínez García; Miguel García-Torres; Federico Divina; José Terrón-Bautista; Irene Delgado-Sainz; Francisco Gómez-Vela; Felipe Cortés-Ledesma (PLoS Comput. Biol., 2021)

Breast Cancer Biomarker Analysis Using Gene Co-expression Networks. - Aurelio López-Fernández; Janire Gallejones-Eskubi; Dulcenombre M. Saz-Navarro; Francisco Antonio Gómez Vela (IWBBIO (2), 2024)

Fraudulent Transactions Identification Using a Machine Learning Approach. - Silvia Vázquez-Noguera; Miguel García-Torres; Sebastián A. Grillo; Francisco Gómez-Vela; Katherin Arrua; Ricardo R. Palma; Lorena Andrea Bearzotti (SOCO (2), 2024)

Computational Ensemble Gene Co-Expression Networks for the Analysis of Cancer Biomarkers. - Julia Figueroa-Martínez; Dulcenombre M. Saz-Navarro; Aurelio López-Fernández; Domingo S. Rodríguez-Baena; Francisco Antonio Gómez Vela (Informatics, 2024)

bioScience: A new python science library for high-performance computing bioinformatics analytics. - Aurelio López-Fernández; Francisco Antonio Gómez Vela; Jorge González-Domínguez; Parameshachari Bidare Divakarachari (SoftwareX, 2024)

CyEnGNet - App: A new Cytoscape app for the reconstruction of large co-expression networks using an ensemble approach. - Dulcenombre M. Saz-Navarro; Aurelio López-Fernández; Francisco Antonio Gómez Vela; Domingo S. Rodríguez-Baena (SoftwareX, 2024)

Optimized Python library for reconstruction of ensemble-based gene co-expression networks using multi-GPU. - Aurelio López-Fernández; Francisco Antonio Gómez Vela; María del Saz-Navarro; Fernando M. Delgado-Chaves; Domingo S. Rodríguez-Baena (J. Supercomput., 2024)

High-Performance Computing-Driven Gene Co-Expression Network Analysis for Biomarkers Discovery in Soft Tissue Sarcomas. - Marc Ríos Cadenas; Aurelio López-Fernández; Francisco Antonio Gómez Vela; Juan A. Ortega; Inmaculada Rincón Pérez (CBMS, 2025)

Data Mining for Enhancing Learning and Assessment to a Microcompetence-Based Methodology in Higher Education. - Aurelio López-Fernández; Federico Divina; Francisco Antonio Gómez Vela; Miguel García-Torres (Rev. Iberoam. de Tecnol. del Aprendiz., 2025)

Biclustering in bioinformatics using big data and High Performance Computing applications: challenges and perspectives, a review. - Aurelio López-Fernández; Francisco Antonio Gómez Vela; Domingo S. Rodríguez-Baena; Fernando M. Delgado-Chaves; Jorge González-Domínguez (J. Supercomput., 2025)

BinRec: addressing data sparsity and cold-start challenges in recommender systems with biclustering. - Domingo S. Rodríguez-Baena; Francisco Gómez-Vela; Aurelio López-Fernández; Miguel García-Torres; Federico Divina (Appl. Intell., 2025)