Genome-wide analysis of core promoter elements from conserved human and mouse orthologous pairs. - Victor X. Jin; Gregory A. Singer; Francisco J. Agosto-Perez; Sandya Liyanarachchi; Ramana V. Davuluri (BMC Bioinform., 2006)

An integrative ChIP-chip and gene expression profiling to model SMAD regulatory modules. - Huaxia Qin; Michael W. Y. Chan; Sandya Liyanarachchi; Curtis Balch; Dustin P. Potter; Irene J. Souriraj; Alfred S. L. Cheng; Francisco J. Agosto-Perez; Elena Nikonova; Pearlly Yan; Huey-Jen Lin; Kenneth P. Nephew; et al. (BMC Syst. Biol., 2009)

MPromDb update 2010: an integrated resource for annotation and visualization of mammalian gene promoters and ChIP-seq experimental data. - Ravi Gupta; Anirban Bhattacharyya; Francisco J. Agosto-Perez; Priyankara Wikramasinghe; Ramana V. Davuluri (Nucleic Acids Res., 2011)

Genome-wide mapping of RNA Pol-II promoter usage in mouse tissues by ChIP-seq. - Hao Sun 001; Jiejun Wu; Priyankara Wikramasinghe; Sharmistha Pal; Ravi Gupta; Anirban Bhattacharyya; Francisco J. Agosto-Perez; Louise C. Showe; Tim Hui-Ming Huang; Ramana V. Davuluri (Nucleic Acids Res., 2011)