DNA Sequences Base Calling by PHRED: Error. - Francisco Prosdocimi; Fabiano Peixoto; José Miguel Ortega (WOB, 2003)

Diet as a Pressure on the Amino Acid Content of Proteomes. - Francisco Prosdocimi; José Miguel Ortega (BSB, 2005)

Genetic algorithm for analysis of mutations in Parkinson's disease. - Rafal Smigrodzki; Ben Goertzel; Cassio Pennachin; Lúcio de Souza Coelho; Francisco Prosdocimi; W. Davis Parker Jr. (Artif. Intell. Medicine, 2005)

Accessing Optimal Primer Distance from Insert. - Francisco Prosdocimi; José Miguel Ortega (Silico Biol., 2005)

Inferring Gene Ontology Category Membership via Gene Expression and Sequence Similarity Data Analysis. - Murilo Saraiva de Queiroz; Francisco Prosdocimi; Izabela Freire Goertzel; Francisco Pereira Lobo; Cassio Pennachin; Ben Goertzel (KR-MED, 2006)

Efficient Secondary Database Driven Annotation Using Model Organism Sequences. - Alessandra C. Faria-Campos; Sérgio Vale Aguiar Campos; Francisco Prosdocimi; Glaura C. Franco; Glória R. Franco; José Miguel Ortega (Silico Biol., 2006)

A set of amino acids found to occur more frequently in human and fly than in plant and yeast proteomes consists of non-essential amino acids. - Francisco Prosdocimi; Maurício de Alvarenga Mudado; José Miguel Ortega (Comput. Biol. Medicine, 2007)

Is it possible that cells have had more than one origin? - Sávio Torres de Farias; Marco V. José; Francisco Prosdocimi (Biosyst., 2021)

Life and living beings under the perspective of organic macrocodes. - Francisco Prosdocimi; Sávio Torres de Farias (Biosyst., 2021)

Entering the labyrinth: A hypothesis about the emergence of metabolism from protobiotic routes. - Francisco Prosdocimi; Sávio Torres de Farias (Biosyst., 2022)

Prebiotic chemical refugia: multifaceted scenario for the formation of biomolecules in primitive Earth. - Francisco Prosdocimi; Sávio Torres de Farias; Marco V. José (Theory Biosci., 2022)

Decoding viruses: An alternative perspective on their history, origins and role in nature. - Francisco Prosdocimi; Juliana Reis Cortines; Marco V. José; Sávio Torres de Farias (Biosyst., 2023)

Coacervates meet the RNP-world: liquid-liquid phase separation and the emergence of biological compartmentalization. - Francisco Prosdocimi; Sávio Torres de Farias (Biosyst., 2025)