Building Integrated Systems for Data Representation and Analysis in Molecular Biology. - Guy Perrière; François Chevenet; Frank Dorkeld; Thierry Vermat; Christian Gautier (HICSS (5), 1994)

A World Wide Web-to-Database Connectivity using Tcl/Tk: The Hydrology-Meteorology Toolkit. - François Chevenet; Guillaume Le Stum (Tcl/Tk Workshop, 1997)

PRODISTIN Web Site: a tool for the functional classification of proteins from interaction networks. - Anaïs Baudot; David Martin 003; Pierre Mouren; François Chevenet; Alain Guénoche; Bernard Jacq; Marie-Christine Brun (Bioinform., 2006)

TreeDyn: towards dynamic graphics and annotations for analyses of trees. - François Chevenet; Marie-Christine Brun; Anne-Laure Bañuls; Bernard Jacq; Richard Christen (BMC Bioinform., 2006)

OligoHeatMap (OHM): an online tool to estimate and display hybridizations of oligonucleotides onto DNA sequences. - Olivier Croce; François Chevenet; Richard Christen (Nucleic Acids Res., 2008)

Phylogeny.fr: robust phylogenetic analysis for the non-specialist. - Alexis Dereeper; Valentin Guignon; Guillaume Blanc; Stéphane Audic; S. Buffet; François Chevenet; Jean-François Dufayard; Stéphane Guindon; Vincent Lefort; Magali Lescot; Jean-Michel Claverie; Olivier Gascuel (Nucleic Acids Res., 2008)

ScripTree: scripting phylogenetic graphics. - François Chevenet; Olivier Croce; Maxime Hebrard; Richard Christen; Vincent Berry (Bioinform., 2010)

Searching for virus phylotypes. - François Chevenet; Matthieu Jung; Martine Peeters; Tulio de Oliveira; Olivier Gascuel (Bioinform., 2013)

SylvX: a viewer for phylogenetic tree reconciliations. - François Chevenet; Jean-Philippe Doyon; Céline Scornavacca; Edwin Jacox; Emmanuelle Jousselin; Vincent Berry (Bioinform., 2016)

RecPhyloXML: a format for reconciled gene trees. - Wandrille Duchemin; Guillaume Gence; Anne-Muriel Arigon Chifolleau; Lars Arvestad; Mukul S. Bansal; Vincent Berry; Bastien Boussau; François Chevenet; Nicolas Comte; Adrián A. Davín; Christophe Dessimoz; David Dylus; et al. (Bioinform., 2018)

EvoLaps: a web interface to visualize continuous phylogeographic reconstructions. - François Chevenet; Denis Fargette; Stéphane Guindon; Anne-Laure Bañuls (BMC Bioinform., 2021)