Annotation of bacterial genomes using improved phylogenomic profiles. - François Enault; Karsten Suhre; Chantal Abergel; Olivier Poirot; Jean-Michel Claverie (ISMB (Supplement of Bioinformatics), 2003)

Phydbac (phylogenomic display of bacterial genes): an interactive resource for the annotation of bacterial genomes. - François Enault; Karsten Suhre; Olivier Poirot; Chantal Abergel; Jean-Michel Claverie (Nucleic Acids Res., 2003)

Phydbac2: improved inference of gene function using interactive phylogenomic profiling and chromosomal location analysis. - François Enault; Karsten Suhre; Olivier Poirot; Chantal Abergel; Jean-Michel Claverie (Nucleic Acids Res., 2004)

Phydbac "Gene Function Predictor" : a gene annotation tool based on genomic context analysis. - François Enault; Karsten Suhre; Jean-Michel Claverie (BMC Bioinform., 2005)

Alvira: comparative genomics of viral strains. - François Enault; Romain Fremez; Eric Baranowski; Thomas Faraut (Bioinform., 2007)

Metavir: a web server dedicated to virome analysis. - Simon Roux; Michaël Faubladier; Antoine Mahul; Nils Paulhe; Aurélien Bernard; Didier Debroas; François Enault (Bioinform., 2011)

Metavir 2: new tools for viral metagenome comparison and assembled virome analysis. - Simon Roux; Jeremy Tournayre; Antoine Mahul; Didier Debroas; François Enault (BMC Bioinform., 2014)

WIsH: who is the host? Predicting prokaryotic hosts from metagenomic phage contigs. - Clovis Galiez; Matthias Siebert; François Enault; Jonathan Vincent; Johannes Söding (Bioinform., 2017)