Seeder: discriminative seeding DNA motif discovery. - François Fauteux; Mathieu Blanchette; Martina V. Stromvik (Bioinform., 2008)

Data Integration and Knowledge Discovery in Life Sciences. - Fazel Famili; Sieu Phan; François Fauteux; Ziying Liu; Youlian Pan (IEA/AIE (3), 2010)

Digitization of trait representation in microarray data analysis of wheat infected by fusarium graminearum. - Youlian Pan; Thérèse Ouellet; Sieu Phan; Alain B. Tchagang; François Fauteux; Dan Tulpan (CIBCB, 2015)

Integration of 3D gene expression patterns and gene regulatory networks for clinical applications in epithelial ovarian cancer. - Alain B. Tchagang; François Fauteux; Youlian Pan (BHI, 2016)

Bioinformatics identification of new targets for improving low temperature stress tolerance in spring and winter wheat. - Alain B. Tchagang; François Fauteux; Dan Tulpan; Youlian Pan (BMC Bioinform., 2017)

Personalized prediction of genes with tumor-causing somatic mutations based on multi-modal deep Boltzmann machine. - Yifeng Li 001; François Fauteux; Jinfeng Zou; André Nantel; Youlian Pan (Neurocomputing, 2019)