A Rapidly Convergent Simulation Method: Mixed Monte Carlo/Stochastic Dynamics. - Frank Guarnieri; W. Clark Still (J. Comput. Chem., 1994)

Conformational Memories and a Simulated Annealing Program That Learns: Application to LTB4. - Frank Guarnieri; Stephen R. Wilson (J. Comput. Chem., 1995)

Use of a horizontal chain reaction for DNA-based addition. - Frank Guarnieri; F. Carter Bancroft (DNA Based Computers, 1996)

Parallel operations in DNA-based computation. - Frank Guarnieri; Martin Orlian; F. Carter Bancroft (DNA Based Computers, 1997)

Grand Canonical Monte Carlo Simulation of Ligand-Protein Binding. - Matthew Clark 001; Frank Guarnieri; Igor Shkurko; Jeffrey S. Wiseman (J. Chem. Inf. Model., 2006)

Conformational memories with variable bond angles. - Robert M. Whitnell; Dow P. Hurst; Patricia H. Reggio; Frank Guarnieri (J. Comput. Chem., 2008)

A fragment-based approach to the SAMPL3 Challenge. - John L. Kulp III; Seth N. Blumenthal; Qiang Wang; Richard L. Bryan; Frank Guarnieri (J. Comput. Aided Mol. Des., 2012)