A Preliminary Study of Molecular Dynamics on Reconfigurable Computers. - Christophe Wolinski; Frans Trouw; Maya B. Gokhale (Engineering of Reconfigurable Systems and Algorithms, 2003)

Hardware/Software Approach to Molecular Dynamics on Reconfigurable Computers. - Ronald Scrofano; Maya B. Gokhale; Frans Trouw; Viktor K. Prasanna (FCCM, 2006)

Accelerating Molecular Dynamics Simulations with Reconfigurable Computers. - Ronald Scrofano; Maya B. Gokhale; Frans Trouw; Viktor K. Prasanna (IEEE Trans. Parallel Distributed Syst., 2008)