Dynamic deterministic effects propagation networks: learning signalling pathways from longitudinal protein array data. - Christian Bender; Frauke Henjes; Holger Fröhlich; Stefan Wiemann; Ulrike Korf; Tim Beißbarth (Bioinform., 2010)

QuantProReloaded: quantitative analysis of microspot immunoassays. - Anika Jöcker; Johanna Sonntag; Frauke Henjes; Frank Götschel; Achim Tresch; Tim Beißbarth; Stefan Wiemann; Ulrike Korf (Bioinform., 2010)

RPPanalyzer: Analysis of reverse-phase protein array data. - Heiko A. Mannsperger; Stephan Gade; Frauke Henjes; Tim Beißbarth; Ulrike Korf (Bioinform., 2010)

Inferring signalling networks from longitudinal data using sampling based approaches in the R-package 'ddepn'. - Christian Bender; Silvia von der Heyde; Frauke Henjes; Stefan Wiemann; Ulrike Korf; Tim Beißbarth (BMC Bioinform., 2011)

Boolean ErbB network reconstructions and perturbation simulations reveal individual drug response in different breast cancer cell lines. - Silvia von der Heyde; Christian Bender; Frauke Henjes; Johanna Sonntag; Ulrike Korf; Tim Beißbarth (BMC Syst. Biol., 2014)