Principal Warps: Thin-Plate Splines and the Decomposition of Deformations. - Fred L. Bookstein (IEEE Trans. Pattern Anal. Mach. Intell., 1989)

Thin-Plate Splines and the Atlas Problem for Biomedical Images. - Fred L. Bookstein (IPMI, 1991)

Edge information at landmarks in medical images. - Fred L. Bookstein; William D. K. Green (VBC, 1992)

A Feature Space for Derivatives of Deformations. - Fred L. Bookstein; William D. K. Green (IPMI, 1993)

A feature space for edgels in images with landmarks. - Fred L. Bookstein; William D. K. Green (J. Math. Imaging Vis., 1993)

Edgewarp: a flexible program package for biometric image warping in two dimensions. - Fred L. Bookstein; William D. K. Green (VBC, 1994)

Combining "Vertical" and "Horizontal" Features from Medical Images. - Fred L. Bookstein (CVRMed, 1995)

"Vertical" and "horizontal": complementary biometric spaces for medical image analysis. - Fred L. Bookstein (ICIP (3), 1995)

Visualizing Group Differences in Outline Shape: Methods from Biometrics of Landmark Points. - Fred L. Bookstein (VBC, 1996)

Three Dimensional MR-Based Morphometric Comparison of Schizophrenic and Normal Cerebral Ventricles. - David Dean; Peter Buckley; Fred L. Bookstein; Janardhan Kamath; David Kwon; Lee Friedman; Christine Lys (VBC, 1996)

Endophrenology: New Statistical Techniques for Studies of Brain Form. - Fred L. Bookstein (NeuroImage, 1996)

Quadratic Variation of Deformations. - Fred L. Bookstein (IPMI, 1997)

Comparison of Traditional Brain Segmentation Tools with 3D Self-Organizing Maps. - David Dean; Krishnamurthy Subramanyan; Janardhan Kamath; Fred L. Bookstein; David C. Wilson; David Kwon; Peter Buckley (IPMI, 1997)

The Softassign Procrustes Matching Algorithm. - Anand Rangarajan 001; Haili Chui; Fred L. Bookstein (IPMI, 1997)

Two shape metrics for biomedical outline data: bending energy, Procrustes distance, and the biometrical modeling of shape phenomena. - Fred L. Bookstein (Shape Modeling International, 1997)

Biomedical Image Analysis. - Amir A. Amini; Fred L. Bookstein; David C. Wilson (Comput. Vis. Image Underst., 1997)

Shape and the Information in Medical Images: A Decade of the Morphometric Synthesis. - Fred L. Bookstein (Comput. Vis. Image Underst., 1997)

Procrustes Distance, bending Energy, and the biometrical Modeling of Shape Phenomena. - Fred L. Bookstein (Int. J. Shape Model., 1997)

Landmark methods for forms without landmarks: morphometrics of group differences in outline shape. - Fred L. Bookstein (Medical Image Anal., 1997)

Features of Deformation Grids: An Approach via Singularity Theory. - Fred L. Bookstein (SCG, 1998)

Singularities as Features of Deformation Grids. - Fred L. Bookstein (MICCAI, 1998)

Creases as local features of deformation grids. - Fred L. Bookstein (Medical Image Anal., 2000)

Surface-bounded Growth Modeling Applied to Human Mandibles. - Per Rønsholt Andresen; Fred L. Bookstein; Knut Conradsen; Bjarne K. Ersbøll; Jeffrey L. Marsh; Sven Kreiborg (IEEE Trans. Medical Imaging, 2000)

"Voxel-Based Morphometry" Should Not Be Used with Imperfectly Registered Images. - Fred L. Bookstein (NeuroImage, 2001)

Corpus Callosum Shape and Neuropsychological Deficits in Adult Males with Heavy Fetal Alcohol Exposure. - Fred L. Bookstein; Ann P. Streissguth; Paul D. Sampson; Paul D. Connor; Helen M. Barr (NeuroImage, 2002)

Intrinsic Random Fields and Image Deformations. - Kanti V. Mardia; Fred L. Bookstein; John T. Kent; Charles R. Meyer (J. Math. Imaging Vis., 2006)

Too much noise in the Times Higher Education rankings. - Fred L. Bookstein; Horst Seidler; Martin Fieder; Georg Winckler (Scientometrics, 2010)

Seeing through the face: a morphological approach in physical anthropology. - Tobias Paul; Fred L. Bookstein; Gerhard W. Weber (FAA, 2012)

Ontology of physics for biology: representing physical dependencies as a basis for biological processes. - Daniel L. Cook; Maxwell Lewis Neal; Fred L. Bookstein; John H. Gennari (J. Biomed. Semant., 2013)

Reworking geometric morphometrics into a methodology of transformation grids. - Fred L. Bookstein (CoRR, 2023)