HuGeMap: a distributed and integrated Human Genome Map database. - Emmanuel Barillot; Frédéric Guyon; Christophe Cussat-Blanc; Eric Viara; Guy Vaysseix (Nucleic Acids Res., 1998)

A proposal for a standard CORBA interface for genome maps. - Emmanuel Barillot; Ulf Leser; Philip Lijnzaad; Christophe Cussat-Blanc; Kim Jungfer; Frédéric Guyon; Guy Vaysseix; Carsten Helgesen; Patricia Rodriguez-Tomé (Bioinform., 1999)

The HuGeMap Database: interconnection and visualization of human genome maps. - Emmanuel Barillot; Stuart Pook; Frédéric Guyon; Christophe Cussat-Blanc; Eric Viara; Guy Vaysseix (Nucleic Acids Res., 1999)

Dual Evolutionary Optimization. - Rodolphe Le Riche; Frédéric Guyon (Artificial Evolution, 2001)

SA-Search: a web tool for protein structure mining based on a Structural Alphabet. - Frédéric Guyon; Anne-Claude Camproux; Joëlle Hochez; Pierre Tufféry (Nucleic Acids Res., 2004)

Improved greedy algorithm for protein structure reconstruction. - Pierre Tufféry; Frédéric Guyon; Philippe Derreumaux (J. Comput. Chem., 2005)

A Hidden Markov Model applied to the protein 3D structure analysis. - Leslie Regad; Frédéric Guyon; Julien Maupetit; Pierre Tufféry; Anne-Claude Camproux (Comput. Stat. Data Anal., 2008)

Comparing bacterial genomes from linear orders of patterns. - Frédéric Guyon; Alain Guénoche (Discret. Appl. Math., 2008)

Comparison of alignment free string distances for complete genome phylogeny. - Frédéric Guyon; Céline Brochier-Armanet; Alain Guénoche (Adv. Data Anal. Classif., 2009)

Frog2: Efficient 3D conformation ensemble generator for small compounds. - Maria A. Miteva; Frédéric Guyon; Pierre Tufféry (Nucleic Acids Res., 2010)

PEP-FOLD: an updated de novo structure prediction server for both linear and disulfide bonded cyclic peptides. - Pierre Thévenet; Yimin Shen; Julien Maupetit; Frédéric Guyon; Philippe Derreumaux; Pierre Tufféry (Nucleic Acids Res., 2012)

Fast protein fragment similarity scoring using a Binet-Cauchy kernel. - Frédéric Guyon; Pierre Tufféry (Bioinform., 2014)

BCSearch: fast structural fragment mining over large collections of protein structures. - Frédéric Guyon; François Martz; Marek Vavrusa; Jérôme Bécot; Julien Rey; Pierre Tufféry (Nucleic Acids Res., 2015)

PatchSearch: A Fast Computational Method for Off-Target Detection. - Inès Rasolohery; Gautier Moroy; Frédéric Guyon (J. Chem. Inf. Model., 2017)

PatchSearch: a web server for off-target protein identification. - Julien Rey; Inès Rasolohery; Pierre Tufféry; Frédéric Guyon; Gautier Moroy (Nucleic Acids Res., 2019)