Frederic Rousseau

Affiliations:
  • KU Leuven, Department of Cellular and Molecular Medicine, Belgium


According to our database1, Frederic Rousseau authored at least 28 papers between 2005 and 2023.

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Bibliography

2023
SNPeffect 5.0: large-scale structural phenotyping of protein coding variants extracted from next-generation sequencing data using AlphaFold models.
BMC Bioinform., December, 2023

2021
In silico prediction of in vitro protein liquid-liquid phase separation experiments outcomes with multi-head neural attention.
Bioinform., 2021

2020
WALTZ-DB 2.0: an updated database containing structural information of experimentally determined amyloid-forming peptides.
Nucleic Acids Res., 2020

Protein Homeostasis Database: protein quality control in E.coli.
Bioinform., 2020

2019
Differential proteostatic regulation of insoluble and abundant proteins.
Bioinform., 2019

2016
From Binding-Induced Dynamic Effects in SH3 Structures to Evolutionary Conserved Sectors.
PLoS Comput. Biol., 2016

2015
What Makes a Protein Sequence a Prion?
PLoS Comput. Biol., 2015

Increased Aggregation Is More Frequently Associated to Human Disease-Associated Mutations Than to Neutral Polymorphisms.
PLoS Comput. Biol., 2015

PrionW: a server to identify proteins containing glutamine/asparagine rich prion-like domains and their amyloid cores.
Nucleic Acids Res., 2015

WALTZ-DB: a benchmark database of amyloidogenic hexapeptides.
Bioinform., 2015

Solubis: optimize your protein.
Bioinform., 2015

2013
Motif Discovery with Data Mining in 3D protein Structure Databases: Discovery, Validation and Prediction of the U-Shape zinc binding ("Huf-zinc") Motif.
J. Bioinform. Comput. Biol., 2013

2012
SNPeffect 4.0: on-line prediction of molecular and structural effects of protein-coding variants.
Nucleic Acids Res., 2012

2011
An Evolutionary Trade-Off between Protein Turnover Rate and Protein Aggregation Favors a Higher Aggregation Propensity in Fast Degrading Proteins.
PLoS Comput. Biol., 2011

BriX: a database of protein building blocks for structural analysis, modeling and design.
Nucleic Acids Res., 2011

A graphical interface for the FoldX forcefield.
Bioinform., 2011

2010
PepX: a structural database of non-redundant protein-peptide complexes.
Nucleic Acids Res., 2010

Modeling protein-peptide interactions using protein fragments: fitting the pieces?
BMC Bioinform., 2010

2009
Accurate Prediction of DnaK-Peptide Binding via Homology Modelling and Experimental Data.
PLoS Comput. Biol., 2009

Information theoretical quantification of cooperativity in signalling complexes.
BMC Syst. Biol., 2009

Using structural bioinformatics to investigate the impact of non synonymous SNPs and disease mutations: scope and limitations.
BMC Bioinform., 2009

2008
Genome-Wide Prediction of SH2 Domain Targets Using Structural Information and the FoldX Algorithm.
PLoS Comput. Biol., 2008

Reconstruction of Protein Backbones from the BriX Collection of Canonical Protein Fragments.
PLoS Comput. Biol., 2008

Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases.
Nucleic Acids Res., 2008

2006
PupaSuite: finding functional single nucleotide polymorphisms for large-scale genotyping purposes.
Nucleic Acids Res., 2006

SNPeffect v2.0: a new step in investigating the molecular phenotypic effects of human non-synonymous SNPs.
Bioinform., 2006

2005
The FoldX web server: an online force field.
Nucleic Acids Res., 2005

SNPeffect: a database mapping molecular phenotypic effects of human non-synonymous coding SNPs.
Nucleic Acids Res., 2005


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