Arithmetic Self-Similarity of Infinite Sequences. - Dimitri Hendriks; Frits Dannenberg; Jörg Endrullis; Mark Dow; Jan Willem Klop (CoRR, 2012)

Computing Cumulative Rewards Using Fast Adaptive Uniformisation. - Frits Dannenberg; Ernst Moritz Hahn; Marta Z. Kwiatkowska (CMSB, 2013)

Precise Parameter Synthesis for Stochastic Biochemical Systems. - Milan Ceska 002; Frits Dannenberg; Marta Z. Kwiatkowska; Nicola Paoletti (CMSB, 2014)

DNA walker circuits: computational potential, design, and verification. - Frits Dannenberg; Marta Z. Kwiatkowska; Chris Thachuk; Andrew J. Turberfield (Nat. Comput., 2015)

Computing Cumulative Rewards Using Fast Adaptive Uniformization. - Frits Dannenberg; Ernst Moritz Hahn; Marta Z. Kwiatkowska (ACM Trans. Model. Comput. Simul., 2015)

Modelling and verification for DNA nanotechnology. - Frits Dannenberg (2016)

Inferring Parameters for an Elementary Step Model of DNA Structure Kinetics with Locally Context-Dependent Arrhenius Rates. - Sedigheh Zolaktaf; Frits Dannenberg; Xander Rudelis; Anne Condon; Joseph M. Schaeffer; Mark Schmidt 001; Chris Thachuk; Erik Winfree (DNA, 2017)

Precise parameter synthesis for stochastic biochemical systems. - Milan Ceska 002; Frits Dannenberg; Nicola Paoletti; Marta Kwiatkowska; Lubos Brim (Acta Informatica, 2017)

Efficient Parameter Estimation for DNA Kinetics Modeled as Continuous-Time Markov Chains. - Sedigheh Zolaktaf; Frits Dannenberg; Erik Winfree; Alexandre Bouchard-Côté; Mark Schmidt 001; Anne Condon (DNA, 2019)

Predicting DNA kinetics with a truncated continuous-time Markov chain method. - Sedigheh Zolaktaf; Frits Dannenberg; Mark Schmidt 001; Anne Condon; Erik Winfree (Comput. Biol. Chem., 2023)