A High Speed Access Method to Data Structures with Inheritance Hierarchy. - Shuichi Nishioka; Fumikazu Konishi; Jun'Ichi Kuroiwa; Makoto Onizuka; Jinnnosuke Nakamura (ICEIS, 1999)

Genome-Wide Functional Annotation Environment forin OBIGrid. - Akinobu Fukuzaki; Takeshi Nagashima; Kaori Ide; Fumikazu Konishi; Mariko Hatakeyama; Shigeyuki Yokoyama; Seiki Kuramitsu; Akihiko Konagaya (LSGRID, 2004)

The Architectural Design of High-Throughput BLAST Services on OBIGrid. - Fumikazu Konishi; Akihiko Konagaya (LSGRID, 2004)

OBIYagns: a grid-based biochemical simulator with a parameter estimator. - Shuhei Kimura; Takuji Kawasaki; Mariko Hatakeyama; Takashi Naka; Fumikazu Konishi; Akihiko Konagaya (Bioinform., 2004)

The Superstructure toward Open Bioinformatics Grid. - Akihiko Konagaya; Fumikazu Konishi; Mariko Hatakeyama; Kenji Satou (New Gener. Comput., 2004)

A case study of instant workbench for InterProScan by Knoppix high throughput computing edition. - Fumikazu Konishi; Shingo Ohki; Yusuke Hamano; Manabu Ishii (HPDC, 2005)

Improving the Research Environment of High Performance Computing for Non-cluster Experts Based on Knoppix Instant Computing Technology. - Fumikazu Konishi; Manabu Ishii; Shingo Ohki; Yusuke Hamano; Shuichi Fukuda; Akihiko Konagaya (Euro-Par, 2006)

Seeing Is Knowing: Visualization of Parameter-Parameter Dependencies in Biomedical Network Models. - Akihiko Konagaya; Ryuzo Azuma; Ryo Umetsu; Shingo Ohki; Fumikazu Konishi; Kazumi Matsumura; Sumi Yoshikawa (Grid Computing for Bioinformatics and Computational Biology, 2007)

RABC: A Conceptual Design of Pervasive Infrastructure for Browser Computing based on Ajax technologies. - Fumikazu Konishi; Manabu Ishii; Shingo Ohki; Ryo Umetsu; Akihiko Konagaya (CCGRID, 2007)

High speed tablation system using an FPGA designed for distribution tables of frequent DNA subsequences. - Yoshiki Yamaguchi; Tsutomu Maruyama; Fumikazu Konishi; Akihiko Konagaya (FPL, 2007)

Discovering Dynamic Characteristics of Biochemical Pathways using Geometric Patterns among Parameter-Parameter Dependencies in Differential Equations. - Ryuzo Azuma; Ryo Umetsu; Shingo Ohki; Fumikazu Konishi; Sumi Yoshikawa; Akihiko Konagaya; Kazumi Matsumura (New Gener. Comput., 2007)

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications. - Toshiaki Katayama; Mark D. Wilkinson; Rutger A. Vos; Takeshi Kawashima; Shuichi Kawashima; Mitsuteru Nakao; Yasunori Yamamoto; Hong-Woo Chun; Atsuko Yamaguchi; Shin Kawano; Jan Aerts; Kiyoko F. Aoki-Kinoshita; et al. (J. Biomed. Semant., 2011)

SAKURAONE: Empowering Transparent and Open AI Platforms through Private-Sector HPC Investment in Japan. - Fumikazu Konishi (CoRR, 2025)