DegSampler: Collapsed Gibbs Sampler for Detecting E3 Binding Sites. - Osamu Maruyama; Fumiko Matsuzaki (BIBE, 2018)

DegSampler3: Pairwise Dependency Model in Degradation Motif Site Prediction of Substrate Protein Sequences. - Osamu Maruyama; Fumiko Matsuzaki (BIBE, 2019)

A Topic-Centric Crowdsourced Assisted Biomedical Literature Review Framework for Academics. - Ryan Hodgson; Jingyun Wang; Alexandra I. Cristea; Fumiko Matsuzaki; Hiroyuki Kubota (EDM, 2022)