Modeling the organization of the WUSCHEL expression domain in the shoot apical meristem. - Henrik Jönsson; Marcus Heisler; G. Venugopala Reddy; Vikas Agrawal; Victoria Gor; Bruce E. Shapiro; Eric Mjolsness; Elliot M. Meyerowitz (ISMB (Supplement of Bioinformatics), 2005)

Robust estimation of stem cell lineages using local graph matching. - Min Liu 008; Amit K. Roy-Chowdhury; G. Venugopala Reddy (CVPR Workshops, 2009)

Exploiting local structure for tracking plant cells in noisy images. - Min Liu 008; Amit K. Roy-Chowdhury; Venugopala Reddy Gonehal (ICIP, 2009)

Pattern analysis of stem cell growth dynamics in the shoot apex of arabidopsis. - Oben M. Tataw; Min Liu 008; Amit K. Roy-Chowdhury; Ram Kishor Yadav; G. Venugopala Reddy (ICIP, 2010)

Cell volume estimation from a sparse collection of noisy confocal image slices. - Anirban Chakraborty 001; Min Liu 008; Katya Mkrtchyan; G. Venugopala Reddy; Amit K. Roy-Chowdhury (ICVGIP, 2010)

Cell Resolution 3D Reconstruction of Developing Multilayer Tissues from Sparsely Sampled Volumetric Microscopy Images. - Anirban Chakraborty 001; Ram Kishor Yadav; G. Venugopala Reddy; Amit K. Roy-Chowdhury (BIBM, 2011)

Efficient cell segmentation and tracking of developing plant meristem. - Katya Mkrtchyan; Damanpreet Singh; Min Liu 008; G. Venugopala Reddy; Amit K. Roy-Chowdhury; M. Gopi 001 (ICIP, 2011)

Alignment of real-time live-cell growth data for quantitative analysis of growth at the shoot apex of Arabidopsis thaliana: deducing the relationship between primordia growth, gene expression and cell behaviors. - Oben M. Tataw; G. Venugopala Reddy; Amit K. Roy-Chowdhury (BCB, 2012)

Quantitative Analysis of Live-Cell Growth at the Shoot Apex of Arabidopsis thaliana: Algorithms for Feature Measurement and Temporal Alignment. - Oben M. Tataw; G. Venugopala Reddy; Eamonn J. Keogh; Amit K. Roy-Chowdhury (IEEE ACM Trans. Comput. Biol. Bioinform., 2013)

Deep Quantized Representation For Enhanced Reconstruction. - Akash Gupta 001; Abhishek Aich; Kevin Rodriguez; G. Venugopala Reddy; Amit K. Roy-Chowdhury (ISBI Workshops, 2020)

Combined computational modeling and experimental analysis integrating chemical and mechanical signals suggests possible mechanism of shoot meristem maintenance. - Mikahl Banwarth-Kuhn; Kevin Rodriguez; Christian Michael; Calvin-Khang Ta; Alexander Plong; Eric Bourgain-Chang; Ali Nematbakhsh; Weitao Chen; Amit K. Roy-Chowdhury; G. Venugopala Reddy; Mark S. Alber (PLoS Comput. Biol., 2022)

Learning Deformable 3D Graph Similarity to Track Plant Cells in Unregistered Time Lapse Images. - Md Shazid Islam; Arindam Dutta; Calvin-Khang Ta; Kevin Rodriguez; Christian Michael; Mark S. Alber; G. Venugopala Reddy; Amit K. Roy-Chowdhury (CoRR, 2023)