sybil - Efficient constraint-based modelling in R. - Gabriel Gelius-Dietrich; Abdelmoneim Amer Desouki; Claus Fritzemeier; Martin J. Lercher (BMC Syst. Biol., 2013)

CycleFreeFlux: efficient removal of thermodynamically infeasible loops from flux distributions. - Abdelmoneim Amer Desouki; Florian Jarre; Gabriel Gelius-Dietrich; Martin J. Lercher (Bioinform., 2015)