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MicrobiomeDB: a systems biology platform for integrating, mining and analyzing microbiome experiments. - Francislon S. Oliveira; John Brestelli; Shon Cade; Jie Zheng 001; John Iodice; Steve Fischer; Cristina Aurrecoechea; Jessica C. Kissinger; Brian P. Brunk; Christian J. Stoeckert Jr.; Gabriel R. Fernandes; David S. Roos; et al. (Nucleic Acids Res., 2018)

Evaluating hierarchical machine learning approaches to classify biological databases. - Pâmela M. Rezende; Joicymara S. Xavier; David B. Ascher; Gabriel R. Fernandes; Douglas E. V. Pires (Briefings Bioinform., 2022)