ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks. - Gabriela Bindea; Bernhard Mlecnik; Hubert Hackl; Pornpimol Charoentong; Marie Tosolini; Amos Kirilovsky; Wolf-Herman Fridman; Franck Pagès; Zlatko Trajanoski; Jérôme Galon (Bioinform., 2009)

iLAP: a workflow-driven software for experimental protocol development, data acquisition and analysis. - Gernot Stocker; Maria Fischer; Dietmar Rieder; Gabriela Bindea; Simon Kainz; Michael Oberstolz; James G. McNally; Zlatko Trajanoski (BMC Bioinform., 2009)

CluePedia Cytoscape plugin: pathway insights using integrated experimental and in silico data. - Gabriela Bindea; Jérôme Galon; Bernhard Mlecnik (Bioinform., 2013)

Automated exploration of gene ontology term and pathway networks with ClueGO-REST. - Bernhard Mlecnik; Jérôme Galon; Gabriela Bindea (Bioinform., 2019)

Complex Portal 2022: new curation frontiers. - Birgit H. M. Meldal; Livia Perfetto; Colin W. Combe; Tiago Lubiana; João Vitor Ferreira Cavalcante; Hema Bye-A-Jee; Andra Waagmeester; Noemi del-Toro; Anjali Shrivastava; Elisabet Barrera; Edith D. Wong; Bernhard Mlecnik; et al. (Nucleic Acids Res., 2022)