Inferences from structural comparison: flexibility, secondary structure wobble and sequence alignment optimization. - Gaihua Zhang; Zhen Su (BMC Bioinform., 2012)

CYPSI: a structure-based interface for cytochrome P450s and ligands in Arabidopsis thaliana. - Gaihua Zhang; Yijing Zhang; Zhen Su (BMC Bioinform., 2012)

RAEdb: a database of enhancers identified by high-throughput reporter assays. - Zena Cai; Ya Cui; Zhiying Tan; Gaihua Zhang; Zhongyang Tan; Xinlei Zhang; Yousong Peng (Database J. Biol. Databases Curation, 2019)

vsRNAfinder: a novel method for identifying high-confidence viral small RNAs from small RNA-Seq data. - Zena Cai; Ping Fu; Ye Qiu; Aiping Wu; Gaihua Zhang; Yirong Wang; Taijiao Jiang; Xing-Yi Ge; Haizhen Zhu; Yousong Peng (Briefings Bioinform., 2022)

Development of human lactate dehydrogenase a inhibitors: high-throughput screening, molecular dynamics simulation and enzyme activity assay. - Yuanyuan Shu; Jianda Yue; Yaqi Li; Yekui Yin; Jiaxu Wang; Tingting Li; Xiao He; Songping Liang; Gaihua Zhang; Zhonghua Liu; Ying Wang (J. Comput. Aided Mol. Des., 2024)