Estimating mutual information and multi-information in large networks - Noam Slonim; Gurinder S. Atwal; Gasper Tkacik; William Bialek (CoRR, 2005)

Decoding spike timing: The differential reverse-correlation method. - Gasper Tkacik; Marcelo O. Magnasco (Biosyst., 2008)

Cell Biology: Networks, Regulation and Pathways. - Gasper Tkacik; William Bialek (Encyclopedia of Complexity and Systems Science, 2009)

Natural images from the birthplace of the human eye - Gasper Tkacik; Patrick Garrigan; Charles P. Ratliff; Grega Milcinski; Jennifer M. Klein; Lucia H. Seyfarth; Peter Sterling; David H. Brainard; Vijay Balasubramanian (CoRR, 2011)

Learning Quadratic Receptive Fields from Neural Responses to Natural Stimuli. - Kanaka Rajan; Olivier Marre; Gasper Tkacik (Neural Comput., 2013)

Stimulus-dependent Maximum Entropy Models of Neural Population Codes. - Einat Granot-Atedgi; Gasper Tkacik; Ronen Segev; Elad Schneidman (PLoS Comput. Biol., 2013)

Transformation of Stimulus Correlations by the Retina. - Kristina D. Simmons; Jason S. Prentice; Gasper Tkacik; Jan Homann; Heather K. Yee; Stephanie E. Palmer; Philip C. Nelson; Vijay Balasubramanian (PLoS Comput. Biol., 2013)

Searching for Collective Behavior in a Large Network of Sensory Neurons. - Gasper Tkacik; Olivier Marre; Dario Amodei; Elad Schneidman; William Bialek; Michael J. Berry II (PLoS Comput. Biol., 2014)

High Accuracy Decoding of Dynamical Motion from a Large Retinal Population. - Olivier Marre; Vicente Botella-Soler; Kristina D. Simmons; Thierry Mora; Gasper Tkacik; Michael J. Berry II (PLoS Comput. Biol., 2015)

Relevant sparse codes with variational information bottleneck. - Matthew Chalk; Olivier Marre; Gasper Tkacik (NIPS, 2016)

Estimating Nonlinear Neural Response Functions using GP Priors and Kronecker Methods. - Cristina Savin; Gasper Tkacik (NIPS, 2016)

Error-Robust Modes of the Retinal Population Code. - Jason S. Prentice; Olivier Marre; Mark L. Ioffe; Adrianna Loback; Gasper Tkacik; Michael J. Berry II (PLoS Comput. Biol., 2016)

Probabilistic models for neural populations that naturally capture global coupling and criticality. - Jan Humplik; Gasper Tkacik (PLoS Comput. Biol., 2017)

Nonlinear decoding of a complex movie from the mammalian retina. - Vicente Botella-Soler; Stéphane Deny; Georg Martius; Olivier Marre; Gasper Tkacik (PLoS Comput. Biol., 2018)

A Tight Upper Bound on Mutual Information. - Michal Hledík; Thomas R. Sokolowski; Gasper Tkacik (ITW, 2019)

Estimating information in time-varying signals. - Sarah Anhala Cepeda-Humerez; Jakob Ruess; Gasper Tkacik (PLoS Comput. Biol., 2019)

Molecular noise of innate immunity shapes bacteria-phage ecologies. - Jakob Ruess; Maros Pleska; Calin C. Guet; Gasper Tkacik (PLoS Comput. Biol., 2019)

Clustering of Neural Activity: A Design Principle for Population Codes. - Michael J. Berry II; Gasper Tkacik (Frontiers Comput. Neurosci., 2020)

Minimal biophysical model of combined antibiotic action. - Bor Kavcic; Gasper Tkacik; Tobias Bollenbach (PLoS Comput. Biol., 2021)

Path Weight Sampling: Exact Monte Carlo Computation of the Mutual Information between Stochastic Trajectories. - Manuel Reinhardt; Gasper Tkacik; Pieter Rein ten Wolde (CoRR, 2022)

Statistical modeling of adaptive neural networks explains co-existence of avalanches and oscillations in resting human brain. - Fabrizio Lombardi; Selver Pepic; Oren Shriki; Gasper Tkacik; Daniele De Martino (Nat. Comput. Sci., 2023)