Considerations for clinical read alignment and mutational profiling using next-generation sequencing. - Gavin R. Oliver (F1000Research, 2012)

PatternCNV: a versatile tool for detecting copy number changes from exome sequencing data. - Chen Wang 001; Jared Evans; Aditya Bhagwate; Naresh Prodduturi; Vivekananda Sarangi; Mridu Middha; Hugues Sicotte; Peter T. Vedell; Steven N. Hart; Gavin R. Oliver; Jean-Pierre A. Kocher; Matthew J. Maurer; et al. (Bioinform., 2014)

Proceedings of the 15th Annual UT-KBRIN Bioinformatics Summit 2016: Cadiz, KY, USA. 8-10 April 2016. - Eric C. Rouchka; Julia H. Chariker; Benjamin J. Harrison; Juw Won Park; Xueyuan Cao; Stanley Pounds; Susana C. Raimondi; James R. Downing; Raul C. Ribeiro; Jeffrey Rubnitz; Jatinder Lamba; Bernie J. Daigle Jr.; et al. (BMC Bioinform., 2016)

LeafCutterMD: an algorithm for outlier splicing detection in rare diseases. - W. Garrett Jenkinson; Yang I Li; Shubham Basu; Margot A. Cousin; Gavin R. Oliver; Eric W. Klee (Bioinform., 2020)

Universally Rank Consistent Ordinal Regression in Neural Networks. - W. Garrett Jenkinson; Kia Khezeli; Gavin R. Oliver; John Kalantari; Eric W. Klee (CoRR, 2021)

A clinical knowledge graph-based framework to prioritize candidate genes for facilitating diagnosis of Mendelian diseases and rare genetic conditions. - Rohan Gnanaolivu; Gavin R. Oliver; W. Garrett Jenkinson; Emily Blake; Wenan Chen; Nicholas Chia; Eric W. Klee; Chen Wang (BMC Bioinform., 2025)