SInCRe - structural interactome computational resource for Mycobacterium tuberculosis. - Rahul Metri; Sridhar Hariharaputran; Gayatri Ramakrishnan; Praveen Anand; Upadhyayula S. Raghavender; Bernardo Ochoa-Montaño; Alicia P. Higueruelo; Ramanathan Sowdhamini; Nagasuma R. Chandra; Tom L. Blundell; Narayanaswamy Srinivasan (Database J. Biol. Databases Curation, 2015)

DeepRank2: Mining 3D Protein Structures with Geometric Deep Learning. - Giulia Crocioni; Dani L. Bodor; Coos Baakman; Farzaneh M. Parizi; Daniel-T. Rademaker; Gayatri Ramakrishnan; Sven van der Burg; Dario F. Marzella; João M. C. Teixeira; Li C. Xue (J. Open Source Softw., 2024)