The lambda-Game System: An Approach to a Meta-game. - Gen Masumoto; Takashi Ikegami (ECAL, 2001)

Supercomputers Ready for Use as Discovery Machines for Neuroscience. - Moritz Helias; Susanne Kunkel; Gen Masumoto; Jun Igarashi; Jochen Martin Eppler; Shin Ishii; Tomoki Fukai; Abigail Morrison; Markus Diesmann (Frontiers Neuroinformatics, 2012)

Petascale molecular dynamics simulation using the fast multipole method on K computer. - Yousuke Ohno; Rio Yokota; Hiroshi Koyama; Gentaro Morimoto; Aki Hasegawa; Gen Masumoto; Noriaki Okimoto; Yoshinori Hirano; Huda Ibeid; Tetsu Narumi; Makoto Taiji (Comput. Phys. Commun., 2014)

Spiking network simulation code for petascale computers. - Susanne Kunkel; Maximilian Schmidt; Jochen Martin Eppler; Hans Ekkehard Plesser; Gen Masumoto; Jun Igarashi; Shin Ishii; Tomoki Fukai; Abigail Morrison; Markus Diesmann; Moritz Helias (Frontiers Neuroinformatics, 2014)

PyDISH: database and analysis tools for heme porphyrin distortion in heme proteins. - Hiroko X. Kondo; Yusuke Kanematsu; Gen Masumoto; Yu Takano (Database J. Biol. Databases Curation, 2020)