Combining de novo and reference-guided assembly with scaffold_builder. - Genivaldo Gueiros Z. Silva; Bas E. Dutilh; T. David Matthews; Keri Elkins; Robert Schmieder; Elizabeth A. Dinsdale; Robert A. Edwards (Source Code Biol. Medicine, 2013)

SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data. - Genivaldo Gueiros Z. Silva; Kevin T. Green; Bas E. Dutilh; Robert A. Edwards (Bioinform., 2016)