Gene Ontology Assisted Exploratory Microarray Clustering and Its Application to Cancer. - Geoff MacIntyre; James Bailey 001; Daniel Gustafsson; Alex Boussioutas; Izhak Haviv; Adam Kowalczyk (PRIB, 2008)

A voting approach to identify a small number of highly predictive genes using multiple classifiers. - Md. Rafiul Hassan; M. Maruf Hossain; James Bailey 001; Geoff MacIntyre; Joshua Wing Kei Ho; Kotagiri Ramamohanarao (BMC Bioinform., 2009)

is-rSNP: a novel technique for in silico regulatory SNP detection. - Geoff MacIntyre; James Bailey 001; Izhak Haviv; Adam Kowalczyk (Bioinform., 2010)

is-rSNP: a novel technique for in silico regulatory SNP detection. - Geoff MacIntyre; James Bailey 001; Izhak Haviv; Adam Kowalczyk (BMC Bioinform., 2010)

A bi-ordering approach to linking gene expression with clinical annotations in gastric cancer. - Fan Shi; Christopher Leckie; Geoff MacIntyre; Izhak Haviv; Alex Boussioutas; Adam Kowalczyk (BMC Bioinform., 2010)

Using Gene Ontology annotations in exploratory microarray clustering to understand cancer etiology. - Geoff MacIntyre; James Bailey 001; Daniel Gustafsson; Izhak Haviv; Adam Kowalczyk (Pattern Recognit. Lett., 2010)

Replication of epistatic DNA loci in two case-control GWAS studies using OPE algorithm. - Benjamin Goudey; Qiao Wang; Dave Rawlinson 001; Armita Zarnegar; Eder Kikianty; John Markham; Geoff MacIntyre; Gad Abraham; Linda Stern; Michael Inouye; Izhak Haviv; Adam Kowalczyk (BMC Bioinform., 2011)

Highlights from the Student Council Symposium 2011 at the International Conference on Intelligent Systems for Molecular Biology and European Conference on Computational Biology. - Priscila Grynberg; Thomas Abeel; Pedro Lopes 002; Geoff MacIntyre; Lorena Pantano Rubiño (BMC Bioinform., 2011)

Highlights from the Eighth International Society for Computational Biology (ISCB) Student Council Symposium 2012. - Alexander Goncearenco; Priscila Grynberg; Olga B. Botvinnik; Geoff MacIntyre; Thomas Abeel (BMC Bioinform., 2012)

ISCB Computational Biology Wikipedia Competition. - Alex Bateman; Janet Kelso; Daniel Mietchen; Geoff MacIntyre; Tomás Di Domenico; Thomas Abeel; Darren W. Logan; Predrag Radivojac; Burkhard Rost (PLoS Comput. Biol., 2013)

The Regional Student Group Program of the ISCB Student Council: Stories from the Road. - Geoff MacIntyre; Magali Michaut; Thomas Abeel (PLoS Comput. Biol., 2013)

The Young PI Buzz: Learning from the Organizers of the Junior Principal Investigator Meeting at ISMB-ECCB 2013. - Jeroen de Ridder; Yana Bromberg; Magali Michaut; Venkata P. Satagopam; Manuel Corpas; Geoff MacIntyre; Theodore Alexandrov (PLoS Comput. Biol., 2013)

Ten Simple Rules for Starting a Regional Student Group. - Avinash Kumar Shanmugam; Geoff MacIntyre; Magali Michaut; Thomas Abeel (PLoS Comput. Biol., 2013)

Breaking the Ice and Forging Links: The Importance of Socializing in Research. - Miranda D. Stobbe; Tarun Mishra; Geoff MacIntyre (PLoS Comput. Biol., 2013)

Socrates: identification of genomic rearrangements in tumour genomes by re-aligning soft clipped reads. - Jan Schröder; Arthur L. Hsu; Samantha E. Boyle; Geoff MacIntyre; Marek Cmero; Richard W. Tothill; Ricky W. Johnstone; Mark Shackleton; Anthony T. Papenfuss (Bioinform., 2014)

Workshops: A Great Way to Enhance and Supplement a Degree. - Segun A. Fatumo; Sayane Shome; Geoff MacIntyre (PLoS Comput. Biol., 2014)

Paving the Way Towards a Successful and Fulfilling Career in Computational Biology. - Olugbenga Oluseun Oluwagbemi; Marion O. Adebiyi; Segun A. Fatumo; Geoff MacIntyre (PLoS Comput. Biol., 2014)

Establishing and Managing a Global Student Network. - Avinash Kumar Shanmugam; Geoff MacIntyre (PLoS Comput. Biol., 2014)

The evolutionary history of 2,658 cancers. - Moritz Gerstung; Clemency Jolly; Ignaty Leshchiner; Stefan C. Dentro; Santiago Gonzalez; Thomas J. Mitchell; Yulia Rubanova; Pavana Anur; Kaixian Yu; Maxime Tarabichi; Amit G. Deshwar; Jeff Wintersinger; et al. (Nat., 2020)

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes. - Esther Rheinbay; Morten Muhlig Nielsen; Federico Abascal; Jeremiah Wala; Ofer Shapira; Grace Tiao; Henrik Hornshøj; Julian M. Hess; Randi Istrup Juul; Ziao Lin; Lars Feuerbach; Radhakrishnan Sabarinathan; et al. (Nat., 2020)

CNpare: matching DNA copy number profiles. - Blas Chaves-Urbano; Barbara Hernando; Maria J. Garcia; Geoff MacIntyre (Bioinform., 2022)