Scanning protein sequence databanks using a distributed processing workstation network. - Geoffrey J. Barton (Comput. Appl. Biosci., 1991)

An efficient algorithm to locate all locally optimal alignments between two sequences allowing for gaps. - Geoffrey J. Barton (Comput. Appl. Biosci., 1993)

Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation. - C. D. Livingstone; Geoffrey J. Barton (Comput. Appl. Biosci., 1993)

Protein fold recognition from secondary structure assignments. - Robert B. Russell; R. R. Copley; Geoffrey J. Barton (HICSS (5), 1995)

JPred: a consensus secondary structure prediction server. - James A. Cuff; Michele E. Clamp; Asim S. Siddiqui; M. Finlay; Geoffrey J. Barton (Bioinform., 1998)

ProtEST: protein multiple sequence alignments from expressed sequence tags. - James A. Cuff; Ewan Birney; Michele E. Clamp; Geoffrey J. Barton (Bioinform., 2000)

3Dee: a database of protein structural domains. - Asim S. Siddiqui; Uwe Dengler; Geoffrey J. Barton (Bioinform., 2001)

Estimation of P-values for global alignments of protein sequences. - Caleb Webber; Geoffrey J. Barton (Bioinform., 2001)

Visual Representation of Database Search Results: The RHIMS Plot. - David M. A. Martin; Pamela Hill; Geoffrey J. Barton; Andrew J. Flavell (Bioinform., 2003)

Increased Coverage Obtained by Combination of Methods for Protein Sequence Database Searching. - Caleb Webber; Geoffrey J. Barton (Bioinform., 2003)

OXBench: A benchmark for evaluation of protein multiple sequence alignment accuracy. - G. P. S. Raghava; Stephen M. J. Searle; Patrick C. Audley; Jonathan D. Barber; Geoffrey J. Barton (BMC Bioinform., 2003)

The Jalview Java alignment editor. - Michele E. Clamp; James A. Cuff; Stephen M. J. Searle; Geoffrey J. Barton (Bioinform., 2004)

GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes. - David M. A. Martin; Matthew Berriman; Geoffrey J. Barton (BMC Bioinform., 2004)

E-MSD: an integrated data resource for bioinformatics. - Adel Golovin; Thomas J. Oldfield; John G. Tate; Samir S. Velankar; Geoffrey J. Barton; Harry Boutselakis; Dimitris Dimitropoulos; Joël Fillon; A. Hussain; John M. C. Ionides; Melford John; Peter A. Keller; et al. (Nucleic Acids Res., 2004)

Jalview: Visualization and Analysis of Molecular Sequences, Alignments, and Structures. - Andrew M. Waterhouse; James B. Procter; David M. A. Martin; Geoffrey J. Barton (BMC Bioinform., 2005)

Quantification of the variation in percentage identity for protein sequence alignments. - G. P. S. Raghava; Geoffrey J. Barton (BMC Bioinform., 2006)

MACSIMS : multiple alignment of complete sequences information management system. - Julie Dawn Thompson; Arnaud Muller; Andrew M. Waterhouse; James B. Procter; Geoffrey J. Barton; Frédéric Plewniak; Olivier Poch (BMC Bioinform., 2006)

Probabilistic prediction and ranking of human protein-protein interactions. - Michelle S. Scott; Geoffrey J. Barton (BMC Bioinform., 2007)

The relationship between domain-domain interaction orientation and sequence similarity. - Emily R. Jefferson; Geoffrey J. Barton (BMC Syst. Biol., 2007)

Prediction and ranking of human protein-protein interactions within a Bayesian framework. - Michelle S. Scott; Geoffrey J. Barton (BMC Syst. Biol., 2007)

SNAPPI-DB: a database and API of Structures, iNterfaces and Alignments for Protein-Protein Interactions. - Emily R. Jefferson; Thomas P. Walsh; Timothy J. Roberts; Geoffrey J. Barton (Nucleic Acids Res., 2007)

ParCrys: a Parzen window density estimation approach to protein crystallization propensity prediction. - Ian M. Overton; Gianandrea Padovani; Mark A. Girolami; Geoffrey J. Barton (Bioinform., 2008)

The contrasting properties of conservation and correlated phylogeny in protein functional residue prediction. - Jonathan R. Manning; Emily R. Jefferson; Geoffrey J. Barton (BMC Bioinform., 2008)

The Jpred 3 secondary structure prediction server. - Christian Cole; Jonathan D. Barber; Geoffrey J. Barton (Nucleic Acids Res., 2008)

TarO: a target optimisation system for structural biology. - Ian M. Overton; C. A. Johannes van Niekerk; Lester G. Carter; Alice Dawson; David M. A. Martin; Scott Cameron; Stephen A. McMahon; Malcolm F. White; William N. Hunter; James H. Naismith; Geoffrey J. Barton (Nucleic Acids Res., 2008)

SCANPS: a web server for iterative protein sequence database searching by dynamic programing, with display in a hierarchical SCOP browser. - Thomas P. Walsh; Caleb Webber; Stephen M. J. Searle; Shane S. Sturrock; Geoffrey J. Barton (Nucleic Acids Res., 2008)

Jalview Version 2 - a multiple sequence alignment editor and analysis workbench. - Andrew M. Waterhouse; James B. Procter; David M. A. Martin; Michele E. Clamp; Geoffrey J. Barton (Bioinform., 2009)

Kinomer v. 1.0: a database of systematically classified eukaryotic protein kinases. - David M. A. Martin; Diego Miranda-Saavedra; Geoffrey J. Barton (Nucleic Acids Res., 2009)

PIPs: human protein-protein interaction prediction database. - Mark D. McDowall; Michelle S. Scott; Geoffrey J. Barton (Nucleic Acids Res., 2009)

Human miRNA Precursors with Box H/ACA snoRNA Features. - Michelle S. Scott; Fabio Avolio; Motoharu Ono; Angus I. Lamond; Geoffrey J. Barton (PLoS Comput. Biol., 2009)

Human protein-protein interaction prediction. - Mark D. McDowall; Michelle S. Scott; Geoffrey J. Barton (BMC Bioinform., 2010)

Java bioinformatics analysis web services for multiple sequence alignment - JABAWS: MSA. - Peter V. Troshin; James B. Procter; Geoffrey J. Barton (Bioinform., 2011)

NoD: a Nucleolar localization sequence detector for eukaryotic and viral proteins. - Michelle S. Scott; Peter V. Troshin; Geoffrey J. Barton (BMC Bioinform., 2011)

Global network analysis of drug tolerance, mode of action and virulence in methicillin-resistant S. aureus. - Ian M. Overton; Shirley Graham; Katherine A. Gould; Jason Hinds; Catherine H. Botting; Sally Shirran; Geoffrey J. Barton; Peter J. Coote (BMC Syst. Biol., 2011)

Statistical models for RNA-seq data derived from a two-condition 48-replicate experiment. - Marek Gierlinski; Christian Cole; Pietà Schofield; Nicholas J. Schurch; Alexander Sherstnev; Vijender Singh; Nicola Wrobel; Karim Gharbi; Gordon G. Simpson; Tom Owen-Hughes; Mark L. Blaxter; Geoffrey J. Barton (Bioinform., 2015)

14-3-3-Pred: improved methods to predict 14-3-3-binding phosphopeptides. - Fábio Madeira; Michele Tinti; Gavuthami Murugesan; Emily Berrett; Margaret Stafford; Rachel Toth; Christian Cole; Carol MacKintosh; Geoffrey J. Barton (Bioinform., 2015)

JPred4: a protein secondary structure prediction server. - Alexey Drozdetskiy; Christian Cole; James B. Procter; Geoffrey J. Barton (Nucleic Acids Res., 2015)

AlmostSignificant: simplifying quality control of high-throughput sequencing data. - Joseph Ward; Christian Cole; Melanie Febrer; Geoffrey J. Barton (Bioinform., 2016)

JABAWS 2.2 distributed web services for Bioinformatics: protein disorder, conservation and RNA secondary structure. - Peter V. Troshin; James B. Procter; Alexander Sherstnev; Daniel L. Barton; Fábio Madeira; Geoffrey J. Barton (Bioinform., 2018)

How well do RNA-Seq differential gene expression tools perform in a complex eukaryote? A case study in Arabidopsis thaliana. - Kimon Froussios; Nick J. Schurch; Katarzyna Mackinnon; Marek Gierlinski; Céline Duc; Gordon G. Simpson; Geoffrey J. Barton (Bioinform., 2019)

Relative Abundance of Transcripts (RATs): Identifying differential isoform abundance from RNA-seq. - Kimon Froussios; Kira Mourão; Gordon G. Simpson; Geoffrey J. Barton; Nicholas J. Schurch (F1000Research, 2019)

Detection and mitigation of spurious antisense expression with RoSA. - Kira Mourão; Nicholas J. Schurch; Radek Lucoszek; Kimon Froussios; Katarzyna Mackinnon; Céline Duc; Gordon G. Simpson; Geoffrey J. Barton (F1000Research, 2019)

PDBe-KB: a community-driven resource for structural and functional annotations. - Mihaly Varadi; John M. Berrisford; Mandar S. Deshpande; Sreenath Nair; Aleksandras Gutmanas; David R. Armstrong; Lukás Pravda; Bissan Al-Lazikani; Stephen Anyango; Geoffrey J. Barton; Karel Berka; Tom L. Blundell; et al. (Nucleic Acids Res., 2020)

Ankyrin repeats in context with human population variation. - Javier S. Utgés; Maxim I. Tsenkov; Noah J. M. Dietrich; Stuart A. MacGowan; Geoffrey J. Barton (PLoS Comput. Biol., 2021)

PDBe-KB: collaboratively defining the biological context of structural data. - Mihaly Varadi; Stephen Anyango; David R. Armstrong; John M. Berrisford; Preeti Choudhary; Mandar S. Deshpande; Nurul Nadzirin; Sreenath Nair; Lukás Pravda; Ahsan Tanweer; Bissan Al-Lazikani; Claudia Andreini; et al. (Nucleic Acids Res., 2022)

Missense variants in human ACE2 strongly affect binding to SARS-CoV-2 Spike providing a mechanism for ACE2 mediated genetic risk in Covid-19: A case study in affinity predictions of interface variants. - Stuart A. MacGowan; Michael I. Barton; Mikhail Kutuzov; Omer Dushek; P. Anton van der Merwe; Geoffrey J. Barton (PLoS Comput. Biol., 2022)

Comparative evaluation of methods for the prediction of protein-ligand binding sites. - Javier S. Utgés; Geoffrey J. Barton (J. Cheminformatics, 2024)