aLFQ: an R-package for estimating absolute protein quantities from label-free LC-MS/MS proteomics data. - George Rosenberger; Christina Ludwig; Hannes L. Röst; Ruedi Aebersold; Lars Malmström (Bioinform., 2014)

Efficient visualization of high-throughput targeted proteomics experiments: TAPIR. - Hannes L. Röst; George Rosenberger; Ruedi Aebersold; Lars Malmström (Bioinform., 2015)

DIANA - algorithmic improvements for analysis of data-independent acquisition MS data. - Johan Teleman; Hannes L. Röst; George Rosenberger; Uwe Schmitt; Lars Malmström; Johan Malmström; Fredrik Levander (Bioinform., 2015)